Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

X-ray scattering from randomly oriented superhelices. Circular superhelical DNA

C J Benham, G W Brady, D B Fein

    Biophysical Journal
    |March 1, 1980
    PubMed
    Summary
    This summary is machine-generated.

    Related Concept Videos

    You might also read

    Related Articles

    Articles linked to this work by shared authors, journal, and citation graph.

    Sort by
    Same author

    Germ-line transcripts of the immunoglobulin lambda J-C clusters in the mouse: characterization of the initiation sites and regulatory elements.

    Molecular immunology·2001
    Same author

    AT-rich islands in genomic DNA as a novel target for AT-specific DNA-reactive antitumor drugs.

    The Journal of biological chemistry·2001
    Same author

    Stress-induced DNA duplex destabilization in transcriptional initiation.

    Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing·2001
    Same author

    Development of ribozymes that target stathmin, a major regulator of the mitotic spindle.

    Antisense & nucleic acid drug development·2001
    Same author

    An initiation element in the yeast CUP1 promoter is recognized by RNA polymerase II in the absence of TATA box-binding protein if the DNA is negatively supercoiled.

    Proceedings of the National Academy of Sciences of the United States of America·2000
    Same author

    Sequential determination of ligands binding to discrete components in heterogeneous mixtures by iterative panning and blocking (IPAB).

    Journal of molecular biology·2000

    Scattering patterns from helical filaments were calculated. Results indicate superhelical DNA scattering matches coiled coil models, aiding structural analysis.

    Area of Science:

    • Biophysics
    • Structural Biology
    • Polymer Physics

    Background:

    • Understanding the structure of complex helical molecules like DNA is crucial.
    • Superhelical DNA exhibits intricate structures that influence its physical properties.
    • Scattering techniques are vital for probing molecular conformations.

    Purpose of the Study:

    • To calculate scattering functions for finite-length filaments with two orders of helicity.
    • To analyze the contribution of each helical order to the overall scattering pattern.
    • To compare calculated scattering with experimental data from superhelical DNA.

    Main Methods:

    • Theoretical calculation of scattering functions for helical filaments.
    • Approximation of scattering contributions from individual helical orders.

    Related Experiment Videos

  • Comparison of theoretical models with experimental scattering data.
  • Main Results:

    • Each order of helicity approximates scattering as a single helix.
    • The combined scattering is well-represented by the sum of individual helical contributions.
    • Measured scattering from superhelical DNA aligns with calculated patterns for a coiled coil geometry.

    Conclusions:

    • The scattering behavior of complex helices can be simplified by considering individual helical orders.
    • The coiled coil model provides a good approximation for the structure of dissolved superhelical DNA.
    • This study validates theoretical models against experimental observations in biophysical research.