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Updated: May 6, 2026

Combining Analysis of DNA in a Crude Virion Extraction with the Analysis of RNA from Infected Leaves to Discover New Virus Genomes
Published on: July 27, 2018
Abstract:
The Southern gel filter transfer technique has been used to characterize the integrated genome of Moloney murine leukemia virus (M-MuLV) and the genomes of the endogenous viruses of the mouse. Study of 10 clones of rat cell independently infected by M-MuLV indicates a minimum of 15 integration sites into which the M-MuLV provirus can be inserted. No common integration site is observed among these clones. Clones productively infected by M-MuLV acquire multiple proviruses, whereas infected cells unable to produce virus contain only one M-MuLV provirus. Once established, the integrated genomes are stable for at least two years after initial infection. The use of M-MuLV probe allows detection of a spectrum of Eco RI-cleaved mouse DNA fragments containing endogenous MuLV genomes. DNAs of different inbred laboratory mouse strains yield similar patterns of provirus with each strain showing minor characteristic differences. In some instances, mouse cells infected by M-MuLV reveal additional proviruses beyond those seen in the uninfected cell. DNAs from three different M-MuLV-induced thymomas indicate, as in rat cells, multiple possible integration sites.
Insights
Moloney murine leukemia virus (M-MuLV) integrates into at least 15 different sites in rat cells, with no common integration site found. Infected cells can acquire multiple proviruses, which remain stable for years.
Area of Science:
- Virology
- Molecular Biology
- Genomics
Background:
- Murine leukemia viruses are retroviruses known to integrate into host genomes.
- Understanding viral integration sites is crucial for characterizing viral pathogenesis and host-virus interactions.
Purpose of the Study:
- To characterize the integration sites of Moloney murine leukemia virus (M-MuLV) in host genomes.
- To investigate the number and stability of M-MuLV proviruses in infected cells.
- To analyze endogenous murine leukemia virus (MuLV) genomes in mice.
Main Methods:
- Southern gel filter transfer technique was employed.
- Analysis of M-MuLV proviral DNA integration in rat cell clones.
- Detection of endogenous MuLV genomes in mouse DNA using M-MuLV probes.
Main Results:
- M-MuLV integrates into a minimum of 15 distinct sites in rat cells, with no common integration site observed across clones.
- Productively infected cells harbor multiple M-MuLV proviruses, while non-productive cells contain a single provirus.
- Integrated M-MuLV genomes are stable for at least two years.
- Mouse strains exhibit similar endogenous MuLV proviral patterns with minor strain-specific variations.
- M-MuLV infection can lead to additional proviruses beyond endogenous ones.
Conclusions:
- M-MuLV integration is a complex process occurring at numerous sites in the host genome.
- The number of integrated proviruses correlates with viral productive capacity.
- Endogenous MuLV genomes are conserved across mouse strains, with M-MuLV infection potentially altering the viral landscape.
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