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Updated: Jul 21, 2026

Detection of Alternative Splicing During Epithelial-Mesenchymal Transition
Published on: October 9, 2014
Evidence for E-selectin complement regulatory domain mRNA splice variants in the rat
K L Billups1, J L Sherley, M A Palladino
1Department of Urologic Surgery, University of Minnesota, Minneapolis 55455, USA.
Abstract:
The adhesion protein E-selectin is one mediator of endothelial cell-leukocyte interaction during acute inflammation. To investigate the molecular regulation of E-selectin function, we have examined the expression of E-selectin mRNA in target rat tissues after administration of lipopolysaccharide, a potent inducer of acute inflammation. In the course of these studies we isolated two unique rat E-selectin cDNA fragments. Both cDNA fragments show extensive nucleotide sequence homology to previously isolated mouse and human E-selectin cDNAs. However, they differ for the presence of sequences that encode complement regulatory domain-5 (CR5). Previous studies have shown that different animal species express E-selectin mRNAs that encode different numbers of CR domains. The isolation of these two rat E-selectin cDNA fragments, which differ only for the presence of CR5, represents the first direct evidence for the existence of E-selectin CR-variant mRNAs in the same species. Moreover, the sequence of the CR5(-) cDNA is consistent with its origin from an mRNA splice variant of a CR5(+) mRNA. We have demonstrated the presence of the two predicted mRNA species in rat heart tissue and have investigated their expression in response to lipopolysaccharide. Although both mRNA variants were greatly induced by lipopolysaccharide, the CR5(-) form was more abundant in both treated and control tissues. This difference in mRNA abundance may indicate different levels of CR5 variant proteins that perform functionally distinct tasks in E-selectin dependent inflammatory processes.
Insights
Researchers discovered two forms of E-selectin mRNA in rats, differing in a complement regulatory domain (CR5). The CR5-negative variant was more abundant, suggesting distinct roles in inflammation.
Area of Science:
- Molecular Biology
- Immunology
- Biochemistry
Background:
- E-selectin mediates endothelial cell-leukocyte interactions in acute inflammation.
- Lipopolysaccharide (LPS) is a potent inducer of acute inflammation.
Purpose of the Study:
- Investigate the molecular regulation of E-selectin function.
- Examine E-selectin mRNA expression in rat tissues following LPS administration.
Main Methods:
- Isolated two unique rat E-selectin cDNA fragments.
- Analyzed nucleotide sequence homology with mouse and human E-selectin.
- Detected and quantified mRNA variants in rat heart tissue via RT-PCR.
Main Results:
- Identified two rat E-selectin cDNA fragments differing in complement regulatory domain-5 (CR5) sequences.
- Demonstrated the existence of E-selectin CR-variant mRNAs within the same species.
- Observed that both CR5(+) and CR5(-) mRNA variants were induced by LPS, with CR5(-) being more abundant.
Conclusions:
- This study provides the first direct evidence of E-selectin CR-variant mRNAs in rats.
- The differential abundance of CR5(-) mRNA suggests distinct functional roles in E-selectin-mediated inflammatory processes.
- CR5 variant proteins may perform functionally distinct tasks in inflammation.
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