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On the syntactic structure and redundancy distribution of the genetic code
1Departamento de Fisica y Matemáticas, Universidad de las Américas/Puebla, México.
Bio Systems
|January 1, 1994
Abstract:
By means of an algorithm for finding rules in data, it is shown that the genetic code may be written as a codon-tree, independent of amino acid assignments. Considering this tree as a structural description, a low-complexity, context-free grammar of the code is built and its grammar complexity and grammar redundancy calculated. The relationship between the codon-tree and the hierarchy of amino acid categorizations previously introduced by the author is investigated. Interpreting the obtained code's structure as a record of its evolution, some inferences about the divergences of the code series are made.