Related Experiment Video
Updated: Aug 11, 2026

Formation of Covalent DNA Adducts by Enzymatically Activated Carcinogens and Drugs In Vitro and Their Determination by 32P-postlabeling
Published on: March 20, 2018
Benz[a]anthracene diols: predicted carcinogenicity and structure-estrogen receptor binding affinity relationships
1Department of Internal Medicine, Albert B. Chandler Medical Center, University of Kentucky, Lexington 40536, USA.
Abstract:
Benz[a]anthracenes are ubiquitous environmental carcinogens that exert estrogenic and antiestrogenic effects directly or via hydroxylated metabolites. In this paper, the structure-estrogen receptor binding relationships of four 3,9-benz[a]anthracene diols are described: unsubstituted, 7-methyl, 12-methyl, and 7,12-dimethyl. Compounds unsubstituted at the 12-position have flat molecular topology, whereas methyl substitution at the 12-position in the bay region induces twisting of the molecular framework. The oxygen-oxygen distances (11.94-11.98 A) are similar to diethylstilbestrol (12.1 A). The binding affinities range from 0.43% to 26% that of estradiol. Methyl substitution at the 7-position enhances affinity; 12-methyl substitution decreases it. These results are contrary to many estrogen receptor (ER) ligand systems, in which the compounds with the flatter molecular geometries typically have lower binding affinity. Molecular graphics were used to analyze the fit of the four compounds with a receptor excluded volume model for the ER. These studies suggest that these compounds bind to the ER in a manner in which the anthracene fragment acts as the steroid AB-ring mimic (i.e, the benz[a]anthracene 9-position corresponds to the estradiol 3-position). Molecular orbital (AM1) calculations were used to calculate the charges of selected atoms. The 7-methyl compound was found to have greater charge similarity to estradiol than the other three compounds. The high affinity of the 7-methyl compound is ascribed to its charge similarity to estradiol, hydrophobic interactions in the receptor region that would accommodate a substituent in the planar 6-position of a delta 6,7-steroid, and favorable dispersive interactions with the receptor secondary to its extended planar system. Molecular orbital calculations also suggest that some of the benz[a]anthracene monophenols and diphenols have sufficiently low ionization potentials to act as carcinogens by a radical cation process.
Insights
Benz[a]anthracene diols, environmental carcinogens, exhibit varying estrogen receptor binding affinities. The 7-methyl derivative shows enhanced affinity due to structural and charge similarities with estradiol.
Area of Science:
- Environmental Science
- Toxicology
- Molecular Biology
Background:
- Benz[a]anthracenes are environmental carcinogens with known estrogenic and antiestrogenic activities.
- Their hydroxylated metabolites can interact with the estrogen receptor (ER).
Purpose of the Study:
- To investigate the structure-estrogen receptor binding relationships of four 3,9-benz[a]anthracene diols.
- To understand how structural modifications affect ER binding affinity.
Main Methods:
- Synthesis and characterization of four benz[a]anthracene diols (unsubstituted, 7-methyl, 12-methyl, 7,12-dimethyl).
- Estrogen receptor binding assays.
- Molecular graphics and molecular orbital (AM1) calculations.
Main Results:
- Binding affinities varied, ranging from 0.43% to 26% of estradiol.
- 7-Methyl substitution enhanced ER binding affinity, while 12-methyl substitution decreased it.
- Molecular modeling suggested binding modes mimicking steroid structures, with the anthracene fragment acting as a steroid AB-ring mimic.
Conclusions:
- Structural features, particularly methyl substitution at the 7-position, significantly influence benz[a]anthracene diol binding to the estrogen receptor.
- The 7-methyl compound's high affinity is attributed to charge similarity with estradiol and favorable hydrophobic/dispersive interactions.
- Some benz[a]anthracene derivatives may act as carcinogens via radical cation mechanisms.
Related Concept Videos
Aromatic Compounds: Overview
In 1825, Faraday isolated benzene...
Structure of Benzene: Kekulé Model
He proposed that benzene has a cyclic structure of six carbon atoms attached to one hydrogen atom each, with three alternating pi bonds.
Structure of Benzene: Molecular Orbital Model
Criteria for Aromaticity and the Hückel 4n + 2 Rule
For the first time, Eric Hückel, a German chemical physicist, derived a set of structural features for a compound to be classified as aromatic. This is now known as Hückel’s rule or the 4n + 2 rule.
Frost Circles for Different Conjugated Systems
NMR Spectroscopy of Benzene Derivatives

