Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

APIC: a generic interface for sequencing projects

G Bisson1, A Garreau

  • 1CNRS (IMAG-LIFIA), INRIA Rhône-Alpes, Grenoble, France.

Proceedings. International Conference on Intelligent Systems for Molecular Biology
|January 1, 1995
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Quasiparticle Dynamics in a Superconducting Qubit Irradiated by a Localized Infrared Source.

Physical review letters·2024
Same author

Efficient active waveguiding properties of Mo6 nano-cluster-doped polymer nanotubes.

Nanotechnology·2016
Same author

Combined theoretical and time-resolved photoluminescence investigations of [Mo₆Brⁱ₈Br(a)₆]²⁻ metal cluster units: evidence of dual emission.

Physical chemistry chemical physics : PCCP·2015
Same author

A hybrid electroabsorption modulator device for generation of high spectral-efficiency optical modulation formats.

Optics express·2008
Same author

Preoperative localization of parathyroid lesions in hyperparathyroidism: relationship between technetium-99m-MIBI uptake and oxyphil cell content.

Journal of nuclear medicine : official publication, Society of Nuclear Medicine·1998
Same author

Schnitzler's syndrome.

Skeletal radiology·1998
Same journal

Proceedings of the 8th International Conference on Intelligent Systems for Molecular Biology (ISMB 2000). San Diego, California, USA. August 19-23, 2000.

Proceedings. International Conference on Intelligent Systems for Molecular Biology·2001
Same journal

Analysis of gene expression data with pathway scores.

Proceedings. International Conference on Intelligent Systems for Molecular Biology·2000
Same journal

Towards a complete map of the protein space based on a unified sequence and structure analysis of all known proteins.

Proceedings. International Conference on Intelligent Systems for Molecular Biology·2000
Same journal

Mining for putative regulatory elements in the yeast genome using gene expression data.

Proceedings. International Conference on Intelligent Systems for Molecular Biology·2000
Same journal

A multiple alignment algorithm for metabolic pathway analysis using enzyme hierarchy.

Proceedings. International Conference on Intelligent Systems for Molecular Biology·2000
Same journal

Sequence database search using jumping alignments.

Proceedings. International Conference on Intelligent Systems for Molecular Biology·2000
See all related articles

APIC is a versatile graphical interface for visualizing genomic analysis results, aiding method developers and enabling homogeneous comparison across different bioinformatics tools.

Area of Science:

  • Bioinformatics
  • Genomic Data Visualization

Background:

  • Genomic sequence analysis methods generate diverse results requiring effective visualization.
  • Existing analysis tools often lack standardized interfaces for result display and comparison.

Purpose of the Study:

  • To introduce APIC, a generic graphical interface for displaying and comparing results from genomic sequence analysis.
  • To provide a standardized visualization tool for method developers and facilitate cross-tool result comparison.

Main Methods:

  • Development of the APIC (Analysis Pipeline Interface Component) graphical user interface.
  • Implementation of a generic framework capable of visualizing various data types, including genetic/physical maps, curves, and images.

Main Results:

Related Experiment Videos

  • APIC offers a standardized interface for biologists to display results from new sequence analysis methods.
  • The interface enables homogeneous comparison of results from different analysis tools, even those with existing interfaces.
  • APIC includes powerful functions for navigating and browsing through analysis results.

Conclusions:

  • APIC enhances the usability and comparability of genomic sequence analysis results.
  • Its generic nature makes it adaptable for diverse data types and analysis workflows.
  • APIC streamlines the visualization process for both new method development and comparative analysis.