Related Experiment Video
Updated: Oct 23, 2026

The Plant Infection Test: Spray and Wound-Mediated Inoculation with the Plant Pathogen Magnaporthe Grisea
Published on: August 4, 2018
Host species-specific repetitive DNA sequence in the genome of Magnaporthe grisea, the rice blast fungus
1Department of Bioscience and Chemistry, Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Abstract:
We cloned a repetitive sequence to show RFLPs in the genome of Magnaporthe grisea, a fungal pathogen responsible for rice blast. As the sequence was 0.8 kb in length and dispersed in the genome, it was named MGSR1 (for Magnaporthe grisea short repeat 1). MGSR1 was conserved highly in the genome of rice pathogens, but poorly in the genome of pathogens of grasses other than rice. And the RFLPs, displayed with the sequence, could distinguish between clonal lineages in rice-pathogenic isolates. The nucleotide sequence showed the presence of an internal promoter of RNA polymerase III, a 3'-poly(T), and an 8-bp direct repeat in it.
Insights
Researchers identified a repetitive DNA sequence, MGSR1, in the rice blast fungus Magnaporthe grisea. This sequence reveals genetic variations, helping distinguish between fungal lineages that infect rice.
Area of Science:
- Molecular Biology
- Mycology
- Genetics
Background:
- Magnaporthe grisea is a significant fungal pathogen causing rice blast, a major threat to global food security.
- Understanding the genetic diversity within M. grisea is crucial for developing effective disease management strategies.
Purpose of the Study:
- To identify and characterize repetitive DNA sequences in the Magnaporthe grisea genome.
- To utilize these sequences for detecting genetic polymorphisms and differentiating between pathogenic isolates.
Main Methods:
- Cloning of a dispersed, 0.8 kb repetitive sequence, designated MGSR1 (Magnaporthe grisea short repeat 1).
- Analysis of MGSR1 conservation across various fungal pathogens.
- Application of restriction fragment length polymorphisms (RFLPs) using MGSR1 to analyze isolate genomes.
Main Results:
- MGSR1 exhibited high conservation in rice-pathogenic M. grisea but low conservation in pathogens of other grasses.
- RFLPs generated by MGSR1 effectively distinguished between clonal lineages within rice-pathogenic isolates.
- The MGSR1 sequence contains an internal RNA polymerase III promoter, a 3'-poly(T) tail, and an 8-bp direct repeat.
Conclusions:
- MGSR1 is a valuable molecular marker for studying the population genetics of Magnaporthe grisea.
- The sequence's specificity to rice pathogens aids in understanding host-pathogen interactions and evolutionary relationships.
More Related Videos
09:25Genome-wide Analysis of Histone Modifications Distribution using the Chromatin Immunoprecipitation Sequencing Method in Magnaporthe oryzae
Published on: June 2, 2021
07:36Visualizing Early Infection Sites of Rice Blast Disease (Magnaporthe oryzae) on Barley (Hordeum vulgare) Using a Basic Microscope and a Smartphone
Published on: March 17, 2023
Related Concept Videos
LTR Retrotransposons
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
Non-LTR Retrotransposons
Riboswitches
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
piRNA - Piwi-interacting RNAs
CRISPR and crRNAs
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
The Antiviral System of Bacteria and Archaea: CRISPR