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Plasmid-derived DNA Strand Displacement Gates for Implementing Chemical Reaction Networks
Published on: November 25, 2015
DNA restriction-modification systems mediate plasmid maintenance
S Kulakauskas1, A Lubys, S D Ehrlich
1Institut National de la Recherche Agronomique, Jouy-en-Josas, France.
Abstract:
Two plasmid-carried restriction-modification (R-M) systems, EcoRI (from pMB1 of Escherichia coli) and Bsp6I (from pXH13 of Bacillus sp. strain RFL6), enhance plasmid segregational stability in E. coli and Bacillus subtilis, respectively. Inactivation of the endonuclease or the presence of the methylase in trans abolish the stabilizing activity of the R-M systems. We propose that R-M systems mediate plasmid segregational stability by postsegregational killing of plasmid-free cells. Plasmid-encoded methyltransferase modifies host DNA and thus prevents its digestion by the restriction endonuclease. Plasmid loss entails degradation and/or dilution of the methylase during cell growth and appearance of unmethylated sites in the chromosome. Double-strand breaks, introduced at these sites by the endonuclease, eventually cause the death of the plasmid-free cells. Contribution to plasmid stability is a previously unrecognized biological role of the R-M systems.
Insights
Restriction-modification systems enhance plasmid stability by killing plasmid-free cells. This involves methylase dilution, leading to DNA cleavage and cell death, a novel role for these systems.
Area of Science:
- Molecular Biology
- Microbiology
- Genetics
Background:
- Plasmid stability is crucial for maintaining genetic elements in bacterial populations.
- Restriction-modification (R-M) systems are known for their roles in DNA defense and horizontal gene transfer.
- The specific contribution of R-M systems to plasmid stability was previously uncharacterized.
Purpose of the Study:
- To investigate the role of plasmid-carried restriction-modification systems in ensuring plasmid stability.
- To elucidate the mechanism by which R-M systems confer segregational stability to plasmids.
- To identify a previously unrecognized biological function of R-M systems.
Main Methods:
- Studied EcoRI R-M system in Escherichia coli and Bsp6I R-M system in Bacillus subtilis.
- Inactivated the endonuclease component or provided the methylase in trans.
- Assessed plasmid stability and cell viability in the presence and absence of functional R-M systems.
Main Results:
- Plasmid-carried R-M systems, EcoRI and Bsp6I, significantly enhance plasmid stability in their respective hosts.
- Inactivation of the restriction endonuclease or providing the methylase in trans abolished the stabilizing effect.
- Evidence suggests a post-segregational killing mechanism where loss of the methylase leads to host DNA cleavage.
Conclusions:
- Restriction-modification systems play a significant role in maintaining plasmid stability through a post-segregational killing mechanism.
- This mechanism involves the programmed death of plasmid-free cells upon dilution of the plasmid-encoded methylase.
- The contribution to plasmid stability represents a novel biological role for R-M systems.
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