Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

Gnome--an Internet-based sequence analysis tool

K Nakai1, T Tokimori, A Ogiwara

  • 1National Institute for Basic Biology, Okazaki, Japan.

Computer Applications in the Biosciences : CABIOS
|September 1, 1994
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

A study for prevention of chronic fatigue Part 1. Effects of endurance running during one month on blood properties and subjective fatigue.

Environmental health and preventive medicine·2011
Same author

A study for prevention of chronic fatigue. part 2. effects of strenuous physical exercise performed in a training camp on serum enzyme activity levels and subjective fatigue.

Environmental health and preventive medicine·2011
Same author

Accuracy of peak detection in speckle clipping correlation.

Applied optics·2010
Same author

Hematopoietic stem cell transplantation for X-linked thrombocytopenia from a mild symptomatic carrier.

Bone marrow transplantation·2009
Same author

Proteomic analysis of stage I primary lung adenocarcinoma aimed at individualisation of postoperative therapy.

British journal of cancer·2008
Same author

The development of Weinstein's noise sensitivity scale.

Noise & health·2007
Same journal

DCA: an efficient implementation of the divide-and-conquer approach to simultaneous multiple sequence alignment.

Computer applications in the biosciences : CABIOS·1998
Same journal

Two applications to facilitate the viewing of database search result files on the Macintosh.

Computer applications in the biosciences : CABIOS·1998
Same journal

BioWish: a molecular biology command extension to Tcl/Tk.

Computer applications in the biosciences : CABIOS·1998
Same journal

The Sequence Alerting Server--a new WEB server.

Computer applications in the biosciences : CABIOS·1998
Same journal

A software tool for the analysis of mass spectrometric disulfide mapping experiments.

Computer applications in the biosciences : CABIOS·1998
Same journal

SAMBA: hardware accelerator for biological sequence comparison.

Computer applications in the biosciences : CABIOS·1998
See all related articles

Gnome (GenomeNet Open Mail-service Environment) is a user-friendly tool for sequence analysis. It allows researchers to perform homology and motif searches using email, accessing the latest databases efficiently.

Area of Science:

  • Bioinformatics
  • Computational Biology
  • Genomics

Background:

  • Sequence analysis is crucial in modern biological research.
  • Accessing and analyzing large biological databases can be complex.
  • Efficient tools are needed to streamline bioinformatics workflows.

Purpose of the Study:

  • To introduce Gnome (GenomeNet Open Mail-service Environment), a novel sequence analysis tool.
  • To provide an easy-to-use interface for accessing Internet-based bioinformatics services.
  • To facilitate homology searches, motif analysis, and database retrieval via email.

Main Methods:

  • Gnome utilizes an email-based system for submitting search requests to a dedicated search-server.
  • A graphical user interface (GUI) simplifies user interaction.

Related Experiment Videos

  • Search results are efficiently received, viewed, and managed by the system.

    • Main Results:

    • Gnome enables users to perform homology and motif searches against up-to-date databases.
    • The system facilitates efficient retrieval and management of database entries.
    • Both Macintosh and X (Motif) versions of the Gnome client, along with a UNIX server, are available.

    Conclusions:

    • Gnome offers a streamlined and accessible approach to sequence analysis for academic users.
    • The email-based architecture enhances usability and accessibility of complex bioinformatics tools.
    • Free availability of Gnome promotes wider adoption in academic research environments.