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Reconstruction of the seasonally varying contact rate for measles
M Kalivianakis1, S L Mous, J Grasman
1Department of Mathematics, Agricultural University, Wageningen, The Netherlands.
Abstract:
With the extended Kalman filter the time dependent contact rate for measles in the SEIR-model is reconstructed from data of the incidence of this infectious disease in the city of New York. It is concluded that although these data show through the years an irregular change in the number of infected children the contact rate is definitely periodic and follows the season. The analysis gives improved values of the parameters in the SEIR-model for this special problem.
Insights
This study reconstructed the measles contact rate in New York City using the extended Kalman filter. The analysis revealed a seasonal pattern in the contact rate, improving parameters for the SEIR-model.
Area of Science:
- Epidemiology
- Mathematical Modeling
- Public Health
Background:
- Measles incidence in New York City exhibits irregular yearly changes.
- Understanding transmission dynamics is crucial for effective disease control.
Purpose of the Study:
- To reconstruct the time-dependent contact rate of measles.
- To analyze the seasonality of measles transmission.
- To improve parameters within the Susceptible-Exposed-Infectious-Recovered (SEIR) model.
Main Methods:
- Utilized the extended Kalman filter for parameter estimation.
- Reconstructed the contact rate from measles incidence data.
- Applied the SEIR model to New York City data.
Main Results:
- The time-dependent contact rate for measles was successfully reconstructed.
- Despite irregular incidence data, the contact rate demonstrated a clear seasonal periodicity.
- Improved parameter values for the SEIR model were obtained.
Conclusions:
- Measles transmission in New York City is strongly influenced by seasonal factors.
- The extended Kalman filter is effective for estimating time-varying epidemiological parameters.
- Enhanced SEIR model parameters can improve predictions for measles outbreaks.