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Linker-insertion mutagenesis of Pseudomonas aeruginosa outer membrane protein OprF
R S Wong1, H Jost, R E Hancock
1Department of Microbiology, University of British Columbia, Vancouver, Canada.
Abstract:
The oprF gene, expressing Pseudomonas aeruginosa major outer membrane protein OprF, was subjected to semi-random linker mutagenesis by insertion of a 1.3 kb HincII kanamycin-resistance fragment from plasmid pUC4KAPA into multiple blunt-ended restriction sites in the oprF gene. The kanamycin-resistance gene was then removed by PstI digestion, which left a 12 nucleotide pair linker residue. Nine unique clones were identified that contained such linkers at different locations within the oprF gene and were permissive for the production of full-length OprF variants. In addition, one permissive site-directed insertion, one non-permissive insertion and one carboxyterminal insertion leading to proteolytic truncation were also identified. These mutants were characterized by DNA sequencing and reactivity of the OprF variants with a bank of 10 OprF-specific monoclonal antibodies. Permissive clones produced OprF variants that were shown to be reactive with the majority of these monoclonal antibodies, except where the insertion was suspected of interrupting the epitope for the specific monoclonal antibody. In addition, these variants were shown to be 2-mercaptoethanol modifiable, to be resistant to trypsin cleavage in intact cells and partly cleaved to a high-molecular-weight core fragment in outer membranes and , where studied, to be accessible to indirect immunofluorescence labelling in intact cells by monoclonal antibodies specific for surface epitopes. Based on these data, a revised structural model for OprF is proposed.
Insights
Pseudomonas aeruginosa outer membrane protein OprF variants were created using linker mutagenesis. These variants maintain structural integrity and surface epitope accessibility, enabling a revised OprF structural model.
Area of Science:
- Microbiology
- Structural Biology
- Molecular Genetics
Background:
- Pseudomonas aeruginosa outer membrane protein F (OprF) is crucial for bacterial structure and virulence.
- Understanding OprF structure-function relationships is vital for developing targeted therapies.
Purpose of the Study:
- To generate and characterize OprF variants with linker insertions to probe structural domains.
- To investigate the impact of mutations on OprF protein stability, epitope accessibility, and function.
Main Methods:
- Semi-random linker mutagenesis of the oprF gene using a kanamycin-resistance fragment.
- DNA sequencing for mutant characterization.
- Monoclonal antibody binding assays to assess epitope accessibility.
- Biochemical assays (2-mercaptoethanol modification, trypsin cleavage) and immunofluorescence labeling.
Main Results:
- Nine permissive OprF variants with linker insertions were identified, producing full-length proteins.
- OprF variants retained reactivity with most monoclonal antibodies, indicating preserved epitopes.
- Variants showed 2-mercaptoethanol modifiability, resistance to trypsin cleavage in intact cells, and surface accessibility.
Conclusions:
- Linker insertions at permissive sites allow for the production of functional OprF variants.
- The data support a revised structural model for Pseudomonas aeruginosa OprF.
- OprF variants can serve as tools for further structural and functional studies.