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Quantitative Analysis of Alternative Pre-mRNA Splicing in Mouse Brain Sections Using RNA In Situ Hybridization Assay
Published on: August 26, 2018
Structure of the mouse gonadotropin-releasing hormone receptor gene: variant transcripts generated by alternative
1Fishberg Research Center for Neurobiology, Mount Sinai Medical Center, New York, NY 10029.
DNA and Cell Biology
|June 1, 1994
Summary
The mouse gonadotropin-releasing hormone receptor (GnRHR) gene undergoes alternative processing, generating multiple transcript variants. These variants result from alternative splicing and polyadenylation, leading to different receptor protein isoforms.
Area of Science:
- Molecular Biology
- Genetics
- Endocrinology
Background:
- The mouse gonadotropin-releasing hormone receptor (GnRHR) is a G-protein-coupled receptor with a unique lack of a carboxy-terminal domain.
- Understanding GnRHR transcript variants is crucial for comprehending its function and regulation.
Purpose of the Study:
- To investigate the structural basis and origins of alternative GnRHR transcripts in mice.
- To elucidate the gene structure of the mouse GnRHR.
Main Methods:
- Screening of a gonadotrope cell line cDNA library to identify variant receptor transcripts.
- Mapping the mouse GnRHR gene structure using genomic clones.
- Southern blot analysis of mouse genomic DNA.
- Comparative analysis of cDNA and genomic sequences.
Main Results:
- The mouse GnRHR gene comprises three exons spanning over 22 kb.
- 42 variant cDNA clones were identified, with the majority (71%) encoding the functional 327-amino-acid receptor.
- Alternative processing resulted in variant transcripts encoding shorter proteins (261 and 177 amino acids) due to exon skipping or alternative polyadenylation.
Conclusions:
- The mouse GnRHR gene exhibits alternative processing, leading to diverse transcript variants.
- These findings explain the origin of previously identified variant cDNAs.
- Alternative splicing and polyadenylation are key mechanisms generating functional and non-functional GnRHR isoforms.
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