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Preferential replication of defective turnip yellow mosaic virus RNAs that express the 150-kDa protein in cis
1Department of Agricultural Chemistry, Oregon State University, Corvallis.
Abstract:
The turnip yellow mosaic virus genome encodes two proteins (the 150-kDa and 70-kDa proteins) that are proteolytically released from a single precursor and which are essential for RNA replication. Genomes with mutations in either of these coding regions were defective for independent replication in turnip protoplasts. The replication in trans of genomes with mutations in each region was studied by coinoculation with either a helper genome that carries a deletion in the coat protein gene, or with a second defective RNA that carries a mutation in the region encoding the other essential protein. Inefficient trans-replication of the defective RNAs was observed in most cases. In contrast, a defective RNA with a large deletion in the 70-kDa protein coding region could be replicated efficiently in trans, demonstrating that the cis-preference of replication can be overcome in some cases. Defective RNAs encoding wild type 150-kDa protein and defective 70-kDa protein were more efficiently replicated in trans than those encoding defective 150-kDa protein and wild type 70-kDa protein. The results suggest a model in which the 150-kDa and 70-kDa proteins form a relatively stable complex in cis on the viral RNA template.
Insights
Turnip yellow mosaic virus RNA replication requires two essential proteins. While replication is typically cis-dependent, specific mutations allow for efficient trans-replication, suggesting a flexible viral replication complex.
Area of Science:
- Virology
- Molecular Biology
- Plant Pathology
Background:
- Turnip yellow mosaic virus (TYMV) replication is crucial for its life cycle.
- Two viral proteins, 150-kDa and 70-kDa, are essential for RNA replication.
- These proteins are proteolytically cleaved from a single precursor polypeptide.
Purpose of the Study:
- To investigate the cis-preference of TYMV RNA replication.
- To determine if mutations affecting essential replication proteins can be complemented in trans.
- To elucidate the roles of the 150-kDa and 70-kDa proteins in viral RNA replication.
Main Methods:
- Generating TYMV genomes with mutations in the 150-kDa and 70-kDa protein coding regions.
- Assessing independent and trans-replication in turnip protoplasts.
- Utilizing helper genomes and defective RNAs for complementation studies.
Main Results:
- Mutations in essential replication protein genes rendered TYMV genomes defective for independent replication.
- Most defective RNAs showed inefficient replication in trans.
- A defective RNA with a large deletion in the 70-kDa protein gene was efficiently replicated in trans.
- Defective RNAs with wild-type 150-kDa protein were replicated more efficiently in trans than those with wild-type 70-kDa protein.
Conclusions:
- The cis-preference of TYMV RNA replication can be overcome under specific mutational conditions.
- The 150-kDa and 70-kDa proteins likely form a stable complex on the viral RNA template.
- This complex plays a critical role in the cis-acting replication mechanism of TYMV.
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