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A 3D Organotypic Melanoma Spheroid Skin Model
Published on: May 18, 2018
The solution structure of melanoma growth stimulating activity
W J Fairbrother1, D Reilly, T J Colby
1Department of Protein Engineering, Genentech, Inc., South San Francisco, CA 94080-4990.
Journal of Molecular Biology
|September 23, 1994
Summary
The solution structure of melanoma growth stimulating activity (MGSA) was determined using NMR spectroscopy, revealing a dimeric chemokine structure similar to IL-8. Key differences were observed in loop regions and interhelical separation within the dimer.
Area of Science:
- Structural Biology
- Biochemistry
- Molecular Biology
Background:
- Melanoma growth stimulating activity (MGSA) is a dimeric chemokine.
- Understanding chemokine structure is crucial for drug development and biological function insights.
Purpose of the Study:
- To determine the solution structure of melanoma growth stimulating activity (MGSA).
- To compare the MGSA structure with related chemokines like interleukin-8 (IL-8).
Main Methods:
- Two-dimensional homonuclear and three-dimensional heteronuclear NMR spectroscopy were employed.
- Structure calculations utilized a hybrid distance geometry-simulated annealing approach (DGII and X-PLOR).
- A total of 2362 experimental restraints (NOEs, hydrogen bonds, torsion angles) were used.
Main Results:
- The MGSA dimer structure consists of a six-stranded antiparallel beta-sheet and two antiparallel alpha-helices.
- The N- and C-terminal residues (1-7 and 70-73) were found to be disordered.
- Structural comparison revealed similarities to IL-8, with differences in loop regions and interhelical separation (11.7 Å in MGSA vs. 15.3 Å in IL-8).
Conclusions:
- The determined solution structure of MGSA provides insights into chemokine quaternary structure.
- MGSA shares structural homology with IL-8, but exhibits distinct features in loop conformations and dimer interface.
- These structural differences may underlie functional variations between MGSA and IL-8.
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