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Quantification and molecular characterization of hprt mutants of human T-lymphocytes
M M Moore1, K Harrington-Brock, L J Zimmerman
1Genetic Toxicology Division, U.S. Environmental Protection Agency, Research Triangle Park, NC 27711.
Abstract:
Somatic mutations have been implicated as critical early events in carcinogenesis. Point mutations, deletions, and translocation events have been shown to activate oncogenes or inactivate suppressor oncogenes. In human population monitoring, quantitative analysis of mutation events that affect gene function is limited to those genes whose cellular phenotypes can be identified by selection procedures and to those tissues (like blood) that are accessible for analysis. In an effort to determine the frequency and types of mutations that can be detected at the hypoxanthine guanine phosphoribosyltransferase (hprt) gene, we have used the T-cell cloning assay and have developed a strategy to propagate mutants and screen for point mutations and breakage events. Early in the clonal expansion of mutants, 1-2 x 10(4) cells are prepared as a crude cell lysate, and a sample is analyzed using the multiplex polymerase chain reaction (PCR). Those mutants that yield altered DNA fragments are then expanded for Southern blot hybridization, PCR, flanking probe isolation, and DNA sequencing. To date we have found presumed point mutations, intragenic deletions, and deletions that extend outside of the hprt gene. By analyzing mutations in selectable, nonessential gene markers, it should be possible to understand mechanisms of both spontaneous and induced genetic damage. An association of these specific genetic events with human diseases and the evaluation of the ability of environmental chemicals to induce these specific types of mutations will lead to a rational basis for evaluating risks from various chemical exposures.
Insights
Researchers analyzed mutations in the hypoxanthine guanine phosphoribosyltransferase (hprt) gene using T-cell cloning. This method detects point mutations and deletions, aiding in understanding genetic damage and chemical exposure risks.
Area of Science:
- Molecular biology
- Genetics
- Carcinogenesis
Background:
- Somatic mutations are key early events in cancer development.
- Analyzing mutations in human populations is challenging due to tissue accessibility and selection limitations.
- The hypoxanthine guanine phosphoribosyltransferase (hprt) gene is a target for studying genetic damage.
Purpose of the Study:
- To determine the frequency and types of mutations at the hprt gene.
- To develop a strategy for detecting point mutations and breakage events.
- To understand mechanisms of spontaneous and induced genetic damage.
Main Methods:
- Utilized the T-cell cloning assay for mutant propagation.
- Employed multiplex polymerase chain reaction (PCR) for initial screening of DNA fragments.
- Applied Southern blot hybridization, PCR, flanking probe isolation, and DNA sequencing for detailed analysis.
Main Results:
- Identified presumed point mutations within the hprt gene.
- Detected intragenic deletions affecting the hprt gene.
- Observed deletions extending beyond the hprt gene locus.
Conclusions:
- Analyzing mutations in selectable, nonessential genes provides insight into genetic damage mechanisms.
- This approach can help associate specific genetic events with diseases.
- Enables rational risk assessment for environmental chemical exposures.