Altered folate-binding protein mRNA stability in KB cells grown in folate-deficient medium
1Department of Experimental Therapeutics, Grace Cancer Drug Center, Roswell Park Cancer Institute, Buffalo, NY 14263.
Abstract:
Folate-binding protein (FBP), a high-affinity folate receptor, is responsible for cellular accumulation of folate and folate analogs such as methotrexate in human KB (nasopharyngeal carcinoma) cells. Both FBP and FBP mRNA increase 3- to 5-fold when KB cells are grown in folate-deficient (less than 10 nM folate) medium (KB-FD), compared with growth in standard folate-replete medium containing at least 2 microM folate (KB-FR). The possible mechanisms of enhanced FBP gene expression in KB-FD were examined in this study. Southern blot analysis revealed no significant change in the FBP gene organization or copy number in the KB-FD DNA. While hypomethylation of the FBP gene was observed in KB-FD DNA, relative to KB-FR DNA, exposure of KB-FR to the DNA methylation inhibitors did not result in elevated FBP mRNA levels. The transcriptional rate of the FBP gene was the same in KB-FR and KB-FD. RNA half-life studies indicated that the half-life of FBP mRNA in KB-FD was increased approximately 2.5-fold, compared with KB-FR. Thus, the increase in the steady-state levels of FBP mRNA in KB-FD can be attributed partly to increased FBP mRNA stability.
Insights
Folate-binding protein (FBP) mRNA levels increase in folate-deficient cells. This rise is primarily due to enhanced mRNA stability, not increased gene expression or methylation changes.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Folate-binding protein (FBP) facilitates cellular uptake of folate and analogs like methotrexate.
- FBP expression is significantly upregulated in human KB cells under folate-deficient conditions.
Purpose of the Study:
- To investigate the mechanisms behind enhanced FBP gene expression in folate-deficient KB cells.
- To determine if gene organization, copy number, methylation, transcription, or mRNA stability contribute to increased FBP levels.
Main Methods:
- Southern blot analysis to assess FBP gene organization and copy number.
- DNA methylation analysis of FBP gene in folate-replete and deficient cells.
- Assessment of FBP gene transcriptional rates.
- RNA half-life studies to evaluate FBP mRNA stability.
Main Results:
- No significant alterations in FBP gene organization or copy number were observed.
- Folate deficiency led to FBP gene hypomethylation, but methylation inhibitors did not increase FBP mRNA.
- Transcriptional rates of the FBP gene remained constant between conditions.
- FBP mRNA half-life was approximately 2.5-fold longer in folate-deficient cells.
Conclusions:
- The increased FBP mRNA levels in folate-deficient KB cells are primarily attributed to enhanced mRNA stability.
- Mechanisms involving gene organization, copy number, and direct transcriptional regulation do not explain the observed upregulation.
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