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Updated: Aug 26, 2026

CRISPR-Mediated Reorganization of Chromatin Loop Structure
Published on: September 14, 2018
JunB differs from c-Jun in its DNA-binding and dimerization domains, and represses c-Jun by formation of inactive
1Department of Pharmacology, University of California, San Diego, School of Medicine, La Jolla 92093-0636.
Abstract:
JunB differs considerably from c-Jun in its ability to activate AP-1-responsive genes and induce oncogenic transformation. We demonstrate that the decreased ability of JunB to activate gene expression is the result of a small number of amino acid changes between its DNA-binding and dimerization motifs and the corresponding regions of c-Jun. These changes lead to a 10-fold decrease in the DNA-binding activity of JunB. JunB can be converted into a c-Jun-like activator by substituting four amino acids in its DNA-binding and dimerization motifs with the corresponding c-Jun sequences. JunB can also attenuate trans-activation by c-Jun, an activity mediated by its leucine zipper. This ability depends on two glycine residues that decrease the stability of the JunB leucine zipper, resulting in decreased homodimerization and increased heterodimerization. These results illustrate how small changes in primary structure, including chemically conservative changes, can result in functional divergence of two highly related transcriptional regulators.
Insights
JunB protein has reduced gene activation compared to c-Jun due to minor structural changes. Modifying JunB’s DNA-binding and dimerization motifs can restore c-Jun-like activity, highlighting how small sequence variations impact protein function.
Area of Science:
- Molecular Biology
- Protein Structure-Function Relationships
Background:
- JunB and c-Jun are related transcription factors involved in gene regulation.
- Differences in their functional activities, particularly in activating AP-1-responsive genes and oncogenic transformation, are significant.
Purpose of the Study:
- To investigate the molecular basis for the functional divergence between JunB and c-Jun.
- To identify specific amino acid residues responsible for differences in DNA-binding activity and trans-activation capabilities.
Main Methods:
- Comparative analysis of JunB and c-Jun primary structures, focusing on DNA-binding and dimerization motifs.
- Site-directed mutagenesis to substitute JunB amino acids with c-Jun sequences.
- Assays to measure DNA-binding activity, homodimerization, and heterodimerization.
Main Results:
- Small amino acid differences in the DNA-binding and dimerization motifs of JunB account for a 10-fold decrease in its DNA-binding activity compared to c-Jun.
- Substitution of four specific amino acids in JunB converted it into a c-Jun-like activator.
- JunB's leucine zipper, influenced by two glycine residues, mediates attenuation of c-Jun trans-activation by affecting dimerization stability.
Conclusions:
- Minor alterations in the primary structure of JunB, including conservative changes, lead to significant functional divergence from c-Jun.
- These findings elucidate how subtle structural modifications can profoundly impact the activity of related transcriptional regulators.
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