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Updated: Jun 27, 2026

Rapid Synthesis and Screening of Chemically Activated Transcription Factors with GFP-based Reporters
Published on: November 27, 2013
The transactivator proteins VP16 and GAL4 bind replication factor A
Z He1, B T Brinton, J Greenblatt
1Department of Molecular and Medical Genetics, University of Toronto, Canada.
Abstract:
Many transcription factors can activate the initiation of DNA replication. We have used affinity chromatography to show that the acidic activation domains of the transcription factors VP16, GAL4, and p53 each bind selectively to human and yeast replication factor A (RPA). The binding is direct and to the largest subunit of the trimeric RPA complex, RPA-1. Mutations in VP16 that reduce the ability of GAL4-VP16 to activate polyomavirus DNA replication also compromise the binding of VP16 to RPA. We suggest that transcription factors may interact with RPA either to stabilize single-stranded DNA at a replication origin or to recruit DNA polymerase alpha to the replication initiation complex.
Insights
Transcription factors like VP16, GAL4, and p53 directly bind to replication factor A (RPA), a key protein in DNA replication initiation. This interaction is crucial for activating DNA replication and may involve stabilizing DNA or recruiting polymerase alpha.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Transcription factors play a role in initiating DNA replication.
- Replication Factor A (RPA) is essential for DNA replication.
- The interaction between transcription factors and RPA was previously unclear.
Purpose of the Study:
- To investigate the direct interaction between transcription factors and RPA.
- To identify the specific binding sites and subunits involved.
- To understand the functional implications of this interaction in DNA replication.
Main Methods:
- Affinity chromatography was used to purify and identify binding partners.
- Specific transcription factors (VP16, GAL4, p53) and their acidic activation domains were tested.
- Mutational analysis of VP16 was performed to assess binding and functional consequences.
Main Results:
- The acidic activation domains of VP16, GAL4, and p53 selectively bind to human and yeast RPA.
- This binding is direct and occurs with the largest subunit, RPA-1.
- Mutations affecting VP16's ability to activate DNA replication also impaired its binding to RPA.
Conclusions:
- Transcription factors directly interact with RPA-1, a subunit of RPA.
- This interaction likely contributes to stabilizing single-stranded DNA at replication origins.
- Transcription factors may recruit DNA polymerase alpha to the replication initiation complex via RPA.
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