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A Web Tool for Generating High Quality Machine-readable Biological Pathways
Published on: February 8, 2017
Automated MeSH indexing of the World-Wide Web
J Fowler1, V Kouramajian, S Maram
1Department of Community Medicine, Baylor College of Medicine, Houston, Texas 77030, USA.
Proceedings. Symposium on Computer Applications in Medical Care
|January 1, 1995
Summary
We developed an automated system to assign Medical Subject Headings (MeSH) to online biomedical documents, improving information retrieval. This "Web-MeSH Medibot" shows promise for efficient biomedical data indexing.
Area of Science:
- Biomedical Informatics
- Information Science
- Computer Science
Background:
- Effective information retrieval is crucial in the vast biomedical domain.
- Manual indexing of web-based biomedical documents is time-consuming and inconsistent.
- Networked discovery requires standardized methods for organizing research data.
Purpose of the Study:
- To design and implement an automated system for assigning Medical Subject Headings (MeSH) to biomedical documents.
- To facilitate networked discovery and enhance information retrieval from World-Wide Web sources.
- To develop a prototype for an automated indexing tool, the 'Web-MeSH Medibot.'
Main Methods:
- Developing algorithms for automatic MeSH term assignment to web-retrieved documents.
- Implementing prototype systems to test the feasibility of automated biomedical document indexing.
- Utilizing natural language processing and machine learning techniques for term identification.
Main Results:
- Prototype implementations demonstrate significant promise in accurately assigning MeSH terms.
- The system shows potential for automating the indexing process for biomedical literature.
- Initial results suggest feasibility for a fully automated indexing solution.
Conclusions:
- Automated MeSH assignment is a viable approach to improve biomedical information retrieval.
- The 'Web-MeSH Medibot' concept offers a pathway towards efficient, large-scale biomedical data indexing.
- Further development is warranted to create a completely automated indexing tool.

