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Improvements to the GDB Human Genome Data Base

K H Fasman1, S I Letovsky, R W Cottingham

  • 1Division of Biomedical Information Sciences, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.

Nucleic Acids Research
|January 1, 1996
PubMed
Summary
This summary is machine-generated.

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The Human Genome Data Base (GDB) version 6.0 offers enhanced data models for genes and genomic maps. This update provides direct community access for improved data sharing and advanced genomic research capabilities.

Area of Science:

  • Genomics
  • Bioinformatics
  • Database Management

Background:

  • Previous versions of the Human Genome Data Base (GDB) had limitations in data representation and community access.
  • Genomic research requires robust and accessible databases for gene and map information.

Purpose of the Study:

  • To introduce significant improvements in GDB version 6.0.
  • To enhance data representation for genes and genomic maps.
  • To enable direct read/write access for the scientific community.

Main Methods:

  • Revised data representations for genes and genomic maps.
  • Implementation of a new curatorial model for the database.
  • Development of capabilities for third-party annotation.

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Main Results:

  • GDB 6.0 can represent all major genetic and physical map categories with underlying order and distance information.
  • The revised database supports more sophisticated map queries and graphical displays.
  • A richer gene information model facilitates cross-references to functional and phenotypic data.

Conclusions:

  • GDB 6.0 provides a significantly improved platform for genomic data management and access.
  • Direct community read/write access and enhanced data models facilitate collaborative genomic research.
  • The new GDB version supports advanced analysis and integration of diverse genomic information.