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Published on: August 31, 2014
Functional comparison of PML-type and archetype strains of JC virus
Abstract:
Isolates of the human polyomavirus JC can be grouped as either PML-type or archetype strains primarily on the basis of divergence in their regulatory regions. Only PML-type viruses have so far been found to be associated with the human demyelinating disease progressive multifocal leukoencephalopathy. Here we have compared the functional properties of archetype and PML-type regulatory regions with regard to DNA replication and viral gene expression. No significant differences could be detected between archetype and PML-type regions in their ability to direct episomal DNA replication in the presence of JC virus T antigen. When viral gene expression was examined, early- and late-gene promoters from all PML-type strains exhibited a significantly higher activity in glial than in nonglial cells. Surprisingly, archetype strain promoters were also preferentially active in glial cells, although this effect was less pronounced than in PML-type strains. Furthermore, all promoters from archetype strains reacted to the presence of viral T antigen or the glial transcription factor Tst-1/Oct6 in a manner similar to the promoters of the PML-type viral strain Mad-1. Interestingly, T antigen and Tst-1/Oct6 were found to function in a species-specific and cell-type-specific manner, respectively. We concluded from our experiments that the differences in the regulatory regions cannot account for the different biology of archetype and PML-type viral strains.
Insights
Differences in regulatory regions do not explain why PML-type JC polyomaviruses cause progressive multifocal leukoencephalopathy, while archetype strains do not. Both viral types show glial cell preference for gene expression.
Area of Science:
- Virology
- Molecular Biology
- Neuroscience
Background:
- Human polyomavirus JC (JCPyV) strains are classified as PML-type or archetype based on regulatory region differences.
- PML-type JCPyV is associated with progressive multifocal leukoencephalopathy (PML), a severe demyelinating disease.
- Archetype JCPyV strains are typically found in healthy individuals.
Purpose of the Study:
- To compare the functional properties of archetype and PML-type JCPyV regulatory regions.
- To investigate differences in DNA replication and viral gene expression.
- To determine if regulatory region variations account for the distinct pathobiology of JCPyV strains.
Main Methods:
- Functional analysis of viral DNA replication using JC virus T antigen.
- Assessment of early- and late-gene promoter activity in glial and non-glial cells.
- Investigation of promoter response to viral T antigen and glial transcription factor Tst-1/Oct6.
Main Results:
- No significant differences in episomal DNA replication directed by archetype and PML-type regulatory regions.
- Both PML-type and archetype JCPyV promoters showed preferential activity in glial cells, with a stronger effect for PML-type.
- Archetype strain promoters responded similarly to T antigen and Tst-1/Oct6 as PML-type strain Mad-1 promoters.
Conclusions:
- Differences in regulatory regions do not fully explain the distinct biological behavior of archetype and PML-type JCPyV strains.
- Both JCPyV strain types exhibit glial cell-specific gene expression.
- T antigen and Tst-1/Oct6 exhibit species-specific and cell-type-specific functions, respectively.
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