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Direct observation of iron-induced conformational changes of mitochondrial DNA by high-resolution field-emission

M Yaffee1, P Walter, C Richter

  • 1Laboratory for Electron Microscopy I, Swiss Federal Institute of Technology (ETH), Zürich, Switzerland.

Insights

Iron exposure causes rat liver mitochondrial DNA (mtDNA) to unwind. Nanometer-range iron colloids bind to mtDNA, indicating a direct interaction between iron and DNA structure.

Area of Science:

  • Mitochondrial biology
  • Molecular toxicology
  • Biophysics

Background:

  • Mitochondrial DNA (mtDNA) integrity is crucial for cellular respiration and energy production.
  • Iron overload is implicated in various pathologies, but its direct effect on mtDNA topology is not fully understood.

Purpose of the Study:

  • To investigate the impact of Fe(III) gluconate on the structural integrity of rat liver mtDNA.
  • To visualize and characterize the interaction between iron and mtDNA at the nanoscale.

Main Methods:

  • Incubation of respiring rat liver mitochondria with varying doses of Fe(III) gluconate.
  • High-resolution field-emission in-lens scanning electron microscopy (H-FIB-FESEM) with backscattered electron detection.
  • Isolation and imaging of mtDNA from iron-exposed mitochondria.

Main Results:

  • Fe(III) gluconate induces dose-dependent relaxation of supercoiled mtDNA to the open circular form.
  • Anaerobiosis and antioxidants do not completely prevent mtDNA unwinding.
  • H-FIB-FESEM reveals nanometer-range iron colloids directly bound to isolated mtDNA strands.

Conclusions:

  • Iron exposure directly alters mtDNA topology, leading to unwinding and relaxation.
  • Iron colloids form on mtDNA, suggesting a direct physical interaction mechanism.
  • Advanced electron microscopy is effective for visualizing iron-DNA interactions and their structural consequences.

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