Related Experiment Video
Updated: Aug 8, 2026

A Novel Feeder-free System for Mass Production of Murine Natural Killer Cells In Vitro
Published on: January 9, 2018
Target cell-induced perforin mRNA turnover in NK3.3 cells is mediated by multiple elements within the mRNA coding
W S Goebel1, R H Schloemer, Z Brahmi
1Department of Microbiology, Indiana University School of Medicine, Indianapolis 46202, USA.
Abstract:
We have previously shown that in cytolytic cells exposed to sensitive targets the mRNA of the cytolytic protein perforin undergoes rapid downregulation. We now demonstrate that perforin message undergoes accelerated turnover in NK3.3 cells exposed to sensitive TC. This inducible mRNA decay phenomenon is specific for cytolytic protein messages, as levels of the constitutive message beta-actin are unchanged. This TC-induced perforin mRNA turnover cannot be attributed to a blockage of RNA synthesis, or to a rapid half-life (t 1/2). To determine the region(s) within the perforin transcript responsible for governing this TC-mediated turnover event, various segments of the perforin cDNA were cloned and inserted into the 3' UTR of rabbit beta globin (RG). Constructs containing perforin coding region cDNA, but not 3' UTR cDNA, mediated TC-induced mRNA turnover. These data indicate that multiple elements governing perforin mRNA stability reside within the coding region, a novel type of mRNA regulation not previously described.
Insights
Cytolytic cells rapidly degrade perforin mRNA when encountering sensitive targets. This accelerated mRNA decay, specific to cytotoxic proteins, is regulated by elements within the perforin coding region, not its 3' UTR.
Area of Science:
- Molecular Biology
- Immunology
- Cell Biology
Background:
- Cytolytic cells eliminate target cells through cytotoxic proteins like perforin.
- Perforin mRNA levels are known to decrease upon exposure to sensitive targets.
Purpose of the Study:
- To investigate the mechanism of perforin mRNA downregulation in NK3.3 cells upon exposure to target cells (TC).
- To identify the specific regions within the perforin transcript responsible for target cell-mediated mRNA turnover.
Main Methods:
- Exposure of NK3.3 cells to sensitive TC to induce perforin mRNA decay.
- Measurement of perforin and beta-actin mRNA levels.
- Cloning of perforin cDNA segments into the 3' UTR of rabbit beta globin (RG) constructs.
- Analysis of mRNA turnover rates in engineered constructs.
Main Results:
- Perforin mRNA undergoes accelerated turnover in NK3.3 cells exposed to TC.
- This decay is specific to cytotoxic protein messages, as beta-actin mRNA levels remain unchanged.
- The TC-induced turnover is not due to inhibited RNA synthesis or a short intrinsic mRNA half-life.
- Elements within the perforin coding region, not the 3' UTR, mediate TC-induced mRNA turnover.
Conclusions:
- Target cell exposure induces a novel mRNA decay mechanism for perforin.
- Regulatory elements controlling perforin mRNA stability are located within its coding region.
- This finding represents a previously undescribed mode of mRNA regulation.
Related Concept Videos
Nuclear Export of mRNA
Nonsense-mediated mRNA Decay
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
NF-κB-dependent Signaling Pathway
NF-κB-dependent Signaling Mechanism
The heterodimer of NF-κB...
The Extrinsic Apoptotic Pathway

