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Development of a More Sensitive and Specific Chromogenic Agar Medium for the Detection of Vibrio parahaemolyticus and Other Vibrio Species
Published on: November 8, 2016
Subspecies typing of Vibrio parahaemolyticus by pulsed-field gel electrophoresis
1Department of Microbiology, Soochow University, Taipei, Taiwan. wonghc@mbml.scu.edu.tw
Abstract:
Vibrio parahaemolyticus is one of the most important food-borne pathogens in Taiwan, Japan, and other costal regions. We report on the development of a pulsed-field gel electrophoresis (PFGE) method for the molecular typing of this pathogen. Genomic DNA was digested with SfiI, and the fragments were resolved on 1% agarose with a contour-clamped homogeneous electric field apparatus set at 190 V and a pulse time of 3 to 80 s. A total of 130 selected isolates obtained from outbreaks during 1993 and 1994 on Taiwan were also characterized by this PFGE method. These isolates were grouped into 14 PFGE types which consisted on one to six patterns, and a total of 39 patterns were identified. Most of these domestic clinical isolates could be clustered into several major types (types A, B, C, and G). These major types showed relatively low degrees of similarity to several foreign strains and other domestic but environmental strains. Strain CCRC12863, which originated from Japan, was close to the group consisting of F, G, and H PFGE types, suggesting a clonal relationship between this Japanese strain and other domestic isolates.
Insights
A new pulsed-field gel electrophoresis (PFGE) method effectively types Vibrio parahaemolyticus, a significant food-borne pathogen. This molecular typing revealed distinct genetic profiles among isolates from Taiwan, aiding in understanding pathogen diversity and origins.
Area of Science:
- Microbiology
- Molecular Biology
- Food Safety
Background:
- Vibrio parahaemolyticus is a major food-borne pathogen in coastal regions, particularly Taiwan and Japan.
- Accurate molecular typing is crucial for tracking outbreaks and understanding the epidemiology of V. parahaemolyticus.
Purpose of the Study:
- To develop and validate a pulsed-field gel electrophoresis (PFGE) method for molecular typing of Vibrio parahaemolyticus.
- To characterize clinical isolates of V. parahaemolyticus from Taiwan using the developed PFGE method.
Main Methods:
- Genomic DNA from V. parahaemolyticus isolates was digested with SfiI.
- DNA fragments were separated using 1% agarose gel electrophoresis with a contour-clamped homogeneous electric field (CHEF) apparatus.
- Optimized electrophoresis conditions included 190 V and a pulse time ranging from 3 to 80 seconds.
Main Results:
- The PFGE method successfully differentiated 130 V. parahaemolyticus isolates from Taiwan outbreaks (1993-1994) into 14 distinct PFGE types, identifying a total of 39 unique patterns.
- Most domestic clinical isolates clustered into major types (A, B, C, G), showing limited similarity to foreign and environmental strains.
- A Japanese strain (CCRC12863) exhibited close genetic relatedness to domestic isolates (PFGE types F, G, H), suggesting potential clonal links.
Conclusions:
- The developed PFGE method is a robust tool for molecular typing of Vibrio parahaemolyticus.
- The study identified distinct genetic clusters among Taiwanese clinical isolates and suggested a clonal relationship with a Japanese strain.
- This molecular epidemiology approach aids in understanding the population structure and transmission dynamics of V. parahaemolyticus.
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