Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

PLANET: a phage library analysis expert tool

R Leplae1, A Tramontano

  • 1Istituto di Ricerche di Biologia Molecolare (I.R.B.M.), Rome, Italy.

Physiological Chemistry and Physics and Medical NMR
|January 1, 1995
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

The Snail repressor recruits EZH2 to specific genomic sites through the enrollment of the lncRNA HOTAIR in epithelial-to-mesenchymal transition.

Oncogene·2016
Same author

A cross-sectional nationwide survey on esophageal atresia and tracheoesophageal fistula.

Journal of pediatric surgery·2015
Same author

SAP97-mediated ADAM10 trafficking from Golgi outposts depends on PKC phosphorylation.

Cell death & disease·2014
Same author

Mapping the hydropathy of amino acids based on their local solvation structure.

The journal of physical chemistry. B·2014
Same author

Detection of blood pressure increments in active elderly individuals: the role of ambulatory blood pressure monitoring.

Nutrition, metabolism, and cardiovascular diseases : NMCD·2014
Same author

Covalent binding antibodies suppress advanced glycation: on the innate tier of adaptive immunity.

Acta naturae·2012
Same journal

The physical state of potassium in frog skeletal muscle studied by ion-sensitive microelectrodes and by electron microscopy: interpretation of seemingly incompatible results.

Physiological chemistry and physics and medical NMR·2015
Same journal

Can we see living structure in a cell?

Physiological chemistry and physics and medical NMR·2015
Same journal

Preface for the updated Chinese translation of Gilbert N. Ling's Life at the Cell and Below-Cell Level.

Physiological chemistry and physics and medical NMR·2014
Same journal

A 2004 unanswered letter to the Economist magazine requesting a retraction (and apology).

Physiological chemistry and physics and medical NMR·2014
Same journal

What is life answered in terms of properties and activities of auto-cooperative assemblies of molecules, atoms, ions and electrons called nano-protoplasm.

Physiological chemistry and physics and medical NMR·2014
Same journal

Artifacts of electron microscopy in cells.

Physiological chemistry and physics and medical NMR·2011
See all related articles

This study introduces PLANET, a new software tool for analyzing phage display peptide sequences. PLANET helps manage and statistically analyze the increasing volume of data from random peptide libraries.

Area of Science:

  • Biotechnology
  • Bioinformatics
  • Molecular Biology

Background:

  • Random peptide libraries displayed on filamentous phage are increasingly utilized in scientific research.
  • Despite the growing interest and application of phage display technology, there is a lack of dedicated software for analyzing the resulting sequence data.
  • Existing methods for handling phage library sequences are insufficient for the expanding scope and volume of experimental results.

Purpose of the Study:

  • To develop and describe a software package for the maintenance and statistical analysis of phage library-derived sequences.
  • To address the need for efficient data handling and analysis in laboratories extensively using phage display techniques.
  • To provide a tool compatible with existing bioinformatics packages for sequence analysis.

Main Methods:

Related Experiment Videos

  • Development of an XWindow-based software package named PLANET (Phage Library ANalysis Expert Tool).
  • Implementation of a database system to collect and organize experimental results from phage libraries.
  • Integration of statistical analysis capabilities for phage library sequences.

Main Results:

  • PLANET software has been created for the management and statistical analysis of phage library data.
  • The software provides a structured format for experimental results, compatible with GCG sequence analysis packages.
  • The tool is designed to handle the increasing number of sequences generated from phage display libraries.

Conclusions:

  • PLANET offers a valuable solution for researchers working with phage display technology.
  • The software facilitates efficient analysis and maintenance of large datasets from peptide libraries.
  • This tool supports the ongoing development and application of phage display in various scientific fields.