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Fluorescence studies of lipid association-induced conformational adaptations of an exchangeable amphipathic
V Narayanaswami1, A Frolov, F Schroeder
1Lipid and Lipoprotein Research Group, University of Alberta, Edmonton, Canada.
Abstract:
The conformational adaptability of Manduca sexta apolipophorin III (apoLp-III) has been evaluated by monitoring the spectroscopic properties of its sole tyrosine residue, Tyr145, present in the fifth helical segment of the protein. M. sexta apoLp-III adopts a globular five-helix bundle structure in solution and has been postulated to undergo an opening at putative hinge domains upon interaction with lipid surfaces. Previous results have shown that the intrinsic fluorescence of Tyr145 is highly quenched in the closed, water-soluble conformation but is dramatically enhanced upon lipid association. We have carried out a spectroscopic characterization of Tyr145 and its microenvironment, to enable its use as a structural probe of lipid-induced conformational changes of apoLp-III. The pKa of Tyr145 in lipid-free apoLp-III was found to be 10.5, as determined from uv-spectrophotometry, indicating that, in the ground state, the tyrosyl phenolic group is not ionized under physiological conditions. Compared to free tyrosine in aqueous buffer (pH 7.0), a red shift (77 nm) in the (lambda)max of absorbance of Tyr145 was observed, suggesting that an H-bonding interaction is responsible for the quenched state of tyrosine fluorescence. In an effort to explain the observed quenching phenomenon, the quantum yield and lifetimes of Tyr145 fluorescence emission were investigated as a function of pH and lipid binding. The quantum yield of Tyr145 in lipid-free apoLp-III was enhanced fivefold upon decreasing the pH, with a half-maximal point around pH 5.5. Time-resolved fluorescence decay analysis showed that Tyr145 exhibits nonexponential emission decay with two components having lifetimes of 3.3 ns (76%) and 0.89 ns (24%) in the lipid-free state. The lifetime and amplitude of Tyr145 remain essentially unaltered upon lipid association or decreasing the pH. This is consistent with the hypothesis that, in the lipid-free helix bundle conformation, a quenching residue exists within H-bonding distance of the phenolic side chain of Tyr145 which, at physiological pH, is responsible for the observed fluorescence quenching. Opening of the helix bundle repositions this acceptor base, possibly a carboxylate or an imidazole side chain, making it unavailable for quenching. Using differential polarized phase and modulation fluorometry, it was seen that the segmental motion of Tyr145 is also altered considerably upon lipid interaction. These spectroscopic and motional properties of Tyr145 distinguish this unique residue as a useful probe to monitor structural flexibility of apoLp-III.
Insights
Manduca sexta apolipophorin III (apoLp-III) undergoes conformational changes upon lipid binding. Spectroscopic analysis of Tyr145 reveals a quenching mechanism in the lipid-free state, which is relieved upon lipid interaction, indicating structural flexibility.
Area of Science:
- Biochemistry
- Structural Biology
- Spectroscopy
Background:
- Manduca sexta apolipophorin III (apoLp-III) is a lipid-binding protein with a known five-helix bundle structure.
- Its conformational adaptability is crucial for lipid transport.
- Previous studies suggest apoLp-III undergoes structural changes upon interacting with lipid surfaces.
Purpose of the Study:
- To characterize the spectroscopic properties of Tyr145 in apoLp-III.
- To utilize Tyr145 as a probe for lipid-induced conformational changes.
- To elucidate the mechanism of fluorescence quenching and its relation to protein structure.
Main Methods:
- UV-spectrophotometry to determine pKa.
- Fluorescence spectroscopy to measure quantum yield and lifetimes.
- Time-resolved fluorescence decay analysis.
- Differential polarized phase and modulation fluorometry.
Main Results:
- The pKa of Tyr145 was determined to be 10.5, indicating it is not ionized at physiological pH.
- A red shift in absorbance and fluorescence quenching of Tyr145 was observed in the lipid-free state, attributed to H-bonding.
- Quantum yield increased fivefold upon pH decrease (pKa ~5.5) and remained unaltered upon lipid binding.
- Time-resolved fluorescence showed nonexponential decay with two components (3.3 ns and 0.89 ns).
- Lipid interaction altered the segmental motion of Tyr145.
Conclusions:
- Tyr145 fluorescence quenching in lipid-free apoLp-III is due to an intramolecular H-bonding interaction.
- This quenching is relieved upon lipid binding, consistent with helix bundle opening.
- Tyr145 serves as an effective spectroscopic probe for monitoring apoLp-III structural flexibility and conformational changes.
- The altered motional properties of Tyr145 upon lipid interaction further support its utility as a structural probe.