Related Experiment Video
Updated: Aug 13, 2026

Quantification of Colonic Stem Cell Mutations
Published on: September 25, 2015
Quantification of proliferating cell nuclear antigen in large intestinal crypt by computer-assisted image analysis
H C Lin1, A V Sotnikov, L Fosdick
1Department of Molecular & Cellular Toxicology, Harvard School of Public Health, Boston, Massachusetts 02115, USA.
Computer-assisted image analysis (CAIA) reliably quantifies proliferating cell nuclear antigen (PCNA) labeling in colorectal crypts. This automated method offers a practical alternative to manual scoring for assessing cell proliferation.
Area of Science:
- Gastroenterology
- Oncology
- Pathology
Background:
- Proliferating cell nuclear antigen (PCNA) is a biomarker for cell proliferation.
- Accurate quantification of PCNA labeling in colorectal crypts is crucial for disease diagnosis and research.
- Manual scoring of PCNA labeling can be subjective and time-consuming.
Purpose of the Study:
- To compare the accuracy and reliability of computer-assisted image analysis (CAIA) with traditional visual scoring for measuring PCNA labeling in colorectal crypts.
- To evaluate CAIA as a practical alternative for assessing colorectal epithelial cell proliferation.
Main Methods:
- Rectal biopsy specimens from 32 patients were immunostained for PCNA.
- Serial crypt sections were analyzed using both CAIA and visual scoring by experienced observers.
- Labeling index (LI) was calculated based on PCNA-labeled nuclei area (CAIA) or labeled cells (visual scoring) within crypt compartments.
Main Results:
- A high Spearman correlation (rs = 0.89) was observed between CAIA and visual scoring methods.
- CAIA yielded an average LI of 1.04 +/- 0.18, while visual scoring resulted in 3.91 +/- 0.46.
- Despite differences in LI ranges, CAIA demonstrated reliable subject ranking.
Conclusions:
- Computer-assisted image analysis (CAIA) provides a reliable and practical method for quantifying PCNA labeling in colorectal epithelial cells.
- CAIA offers a valuable alternative to manual scoring, potentially improving efficiency and consistency in proliferation assessment.
More Related Videos
07:48Protocols for Analyzing the Role of Paneth Cells in Regenerating the Murine Intestine using Conditional Cre-lox Mouse Models
Published on: November 21, 2015
07:05Important Endpoints and Proliferative Markers to Assess Small Intestinal Injury and Adaptation using a Mouse Model of Chemotherapy-Induced Mucositis
Published on: May 12, 2019