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IBIS version 3: an OSF/Motif-based interface for IBIS--integrated biological imaging system

J P Rolland1, M J Flifla, M Garreau

  • 1Biologie Cellulaire et Reproduction, URA CNRS, Université de Rennes, France. jrolland@univ-rennes1.fr

Computer Applications in the Biosciences : CABIOS
|June 1, 1996
PubMed
Summary

The IBIS (Image-Based Information System) software, version 3, offers advanced image processing for biological macromolecule structural analysis. This free, portable package enhances electron micrograph analysis for researchers worldwide.

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IBIS integrated biological imaging system: electron micrograph image-processing software running on Unix workstations.

Computer applications in the biosciences : CABIOS·1992

Area of Science:

  • Structural Biology
  • Biophysics
  • Computational Biology

Background:

  • Electron microscopy is crucial for visualizing biological macromolecules.
  • Accurate image processing is essential for reliable structural analysis.
  • Existing software may lack portability or comprehensive features.

Purpose of the Study:

  • To introduce IBIS version 3, an enhanced software package for electron micrograph processing.
  • To provide a portable and user-friendly tool for structural analysis of biological macromolecules.
  • To facilitate the sharing of advanced image analysis tools among research laboratories.

Main Methods:

  • Development of IBIS version 3 using FORTRAN 77 for mathematical functions and C for display routines.
  • Implementation of a UNIX/OSF/Motif 1.2 interface for visual display and operation management.

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  • Ensuring software portability across different computing environments.

    • Main Results:

    • IBIS version 3 provides a comprehensive suite of tools for electron micrograph image processing.
    • The software includes new functions and an improved OSF/Motif interface for enhanced usability.
    • The package is available free of charge via anonymous FTP, promoting accessibility.

    Conclusions:

    • IBIS version 3 represents a significant advancement in computational tools for structural biology.
    • The software's portability and free availability lower barriers for advanced macromolecular analysis.
    • This tool will aid researchers in obtaining high-resolution structural information from electron micrographs.