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Mutations of E2F-4 trinucleotide repeats in colorectal cancer with microsatellite instability
T Yoshitaka1, N Matsubara, M Ikeda
1First Department of Surgery, Okayama, University Medical School, Japan.
Abstract:
Genetic instability at microsatellites in some colorectal cancer (CRC) have been linked to the defects of human mismatch repair genes, but the targets of these defective genes have been largely unknown. We screened CRC specimens for alteration of E2F-4 gene by analyzing both cDNA and genomic sequences along with replication error (RER+) phenotype. Two out of 20 sporadic CRC patients showed RER+ phenotype. We found tumor-specific copy number alteration in 13 consecutive trinucleotide (CAG) repeats within the coding exon of E2F-4 exclusively in these 2 specimens. Thus, E2F-4 may be a clue of the target gene of defective repair genes in CRC with genetic instability in addition to the TGF-beta type II receptor gene.
Insights
Defective DNA repair genes in colorectal cancer (CRC) can cause genetic instability. Researchers identified alterations in the E2F-4 gene in CRC patients with this instability, suggesting E2F-4 as a potential target gene.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Microsatellite instability in colorectal cancer (CRC) is linked to defects in DNA mismatch repair genes.
- The specific gene targets affected by these defects in CRC remain largely unidentified.
Purpose of the Study:
- To investigate potential targets of defective DNA repair genes in CRC.
- To screen for alterations in the E2F-4 gene in CRC specimens exhibiting genetic instability.
Main Methods:
- Analysis of both cDNA and genomic sequences of the E2F-4 gene.
- Screening of sporadic CRC specimens for the replication error-positive (RER+) phenotype.
- Identification of tumor-specific copy number alterations within the E2F-4 gene.
Main Results:
- Two out of 20 sporadic CRC patients displayed the RER+ phenotype.
- Tumor-specific copy number alterations in 13 consecutive trinucleotide (CAG) repeats within the coding exon of E2F-4 were found exclusively in these two RER+ specimens.
Conclusions:
- The E2F-4 gene may be a target of defective mismatch repair genes in genetically unstable colorectal cancer.
- E2F-4 represents a potential target in CRC, alongside the TGF-beta type II receptor gene.