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Experimental Approaches to Study Mitochondrial Localization and Function of a Nuclear Cell Cycle Kinase, Cdk1
Published on: February 25, 2016
Interaction of D-type cyclins with a novel myb-like transcription factor, DMP1
1Department of Tumor Cell Biology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Abstract:
The cyclin D-dependent kinases CDK4 and CDK6 trigger phosphorylation of the retinoblastoma protein (RB) late in G1 phase, helping to cancel its growth-suppressive function and thereby facilitating S-phase entry. Although specific inhibition of cyclin D-dependent kinase activity in vivo can prevent cells from entering S phase, it does not affect S-phase entry in cells lacking functional RB, implying that RB may be the only substrate of CDK4 and CDK6 whose phosphorylation is necessary for G1 exit. Using a yeast two-hybrid interactive screen, we have now isolated a novel cyclin D-interacting myb-like protein (designated DMP1), which binds specifically to the nonamer DNA consensus sequences CCCG(G/T)ATGT to activate transcription. A subset of these DMP1 recognition sequences containing a GGA trinucleotide core can also function as Ets-responsive elements. DMP1 mRNA and protein are ubiquitously expressed throughout the cell cycle in mouse tissues and in representative cell lines. DMP1 binds to D-type cyclins directly in vitro and when coexpressed in insect Sf9 cells. In both settings, it can be phosphorylated by cyclin D-dependent kinases, suggesting that its transcriptional activity may normally be regulated through such mechanisms. These results raise the possibility that cyclin D-dependent kinases regulate gene expression in an RB independent manner, thereby serving to link other genetic programs to the cell cycle clock.
Insights
Researchers discovered DMP1, a novel protein interacting with cyclin D-dependent kinases (CDKs). This interaction suggests CDKs regulate gene expression independently of the retinoblastoma protein (RB), linking genetic programs to the cell cycle clock.
Area of Science:
- Molecular Biology
- Cell Cycle Regulation
- Gene Expression Analysis
Background:
- Cyclin-dependent kinases (CDKs) CDK4 and CDK6 phosphorylate the retinoblastoma protein (RB) to promote cell cycle progression.
- RB phosphorylation by CDK4/6 is considered essential for G1 phase exit, but its necessity in RB-deficient cells is unclear.
Purpose of the Study:
- To identify novel substrates and functions of CDK4/6 beyond RB phosphorylation.
- To investigate potential RB-independent roles of CDKs in cell cycle regulation and gene expression.
Main Methods:
- Yeast two-hybrid screening to identify cyclin D-interacting proteins.
- In vitro binding assays and co-expression studies in Sf9 cells.
- Analysis of DNA binding specificity and transcriptional activation.
- Ubiquitous expression analysis of DMP1 mRNA and protein.
Main Results:
- A novel cyclin D-interacting myb-like protein, DMP1, was identified.
- DMP1 binds to specific DNA sequences (CCCG(G/T)ATGT) and activates transcription.
- DMP1 directly interacts with and is phosphorylated by CDK4/6.
- DMP1 is ubiquitously expressed throughout the cell cycle.
Conclusions:
- CDK4/6 may regulate gene expression via DMP1 in an RB-independent manner.
- DMP1 acts as a link between CDKs and genetic programs controlling the cell cycle.
- This finding expands the known regulatory mechanisms of cell cycle progression by CDKs.
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