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Stress responses to DNA damaging agents in the human colon carcinoma cell line, RKO
S E Beard1, S R Capaldi, P Gee
1Xenometrix Inc., Boulder, CO 80301, USA. sbeard@xeno.com
Abstract:
DNA damage results from a wide variety of external agents such as chemicals and radiation. The consequences of exposure to agents that damage DNA have been traditionally studied from the perspective of cell survival and mutagenesis. Mutations are late endpoints of DNA damage. Cells respond to the earlier stages of DNA damage by inducing the expression of several genes, including those specific of the nature of the lesion. These early transcriptional responses are likely to predetermine the later fate of the damaged cell. Genes activated during this early response include those involved in DNA repair, replication, and growth control. We are interested in the transcriptional mechanisms by which cells respond to DNA damaging agents. To facilitate the measurement of gene induction, we used seven different reporter constructs integrated stably into the RKO cell line derived from a human colon carcinoma. These constructs were derived from promoters and/or response elements isolated from genes associated with DNA damage responses in human cells, and were fused to the bacterial reporter gene, choramphenicol acetyl transferase (CAT). The cell lines generated in this manner contain the promoters and/or response elements representing DNA polymerase beta, p53, gadd (growth arrest and DNA damage) 45 and 153, c-fos, TPA response element, and tissue-type plasminogen activator. These recombinant cell lines were assembled in a 96-well microtiter plate permitting their simultaneous exposure to compounds and subsequent CAT protein measurement. This assembly has been designated the CAT-Tox (D) assay. These cell lines were exposed to different classes of DNA damaging agents including those which covalently join bases to form dimers (e.g., UVC irradiation), generate DNA adducts by alkylation (e.g., methylmethane sulfonate [MMS], ethylmethane sulfonate [EMS], N-methyl-N-nitro-N-nitrosoguanine [MNNG], dimethylnitrosamine [DMN]), cross-link DNA (e.g., mitomycin C), and inhibit DNA replication by intercalative (e.g., actinomycin D) and nonintercalative (e.g., hydroxyurea) mechanisms. The transcriptional responses were measured as a function of the accumulation of CAT protein using antibodies against CAT protein in a standard ELISA. Endogenous cellular responses were evaluated for a number of the genes represented in the assay at both the mRNA and protein levels by Northern and Western blot analysis, respectively. These data corroborate the stress-induced responses measured by CAT ELISA in the CAT-Tox (D) assay, demonstrating the usefulness of this assay as a rapid and sensitive method for detection of DNA damaging agents in human cells.
Insights
Cells rapidly respond to DNA damage by activating specific genes. The CAT-Tox (D) assay effectively measures these early transcriptional responses, identifying DNA-damaging agents in human cells.
Area of Science:
- Molecular Biology
- Toxicology
- Genetics
Background:
- DNA damage from external agents like chemicals and radiation is a significant concern.
- Traditionally, DNA damage consequences are studied via cell survival and mutagenesis, which are late endpoints.
- Early transcriptional responses to DNA damage, involving gene induction, likely predetermine cell fate.
Purpose of the Study:
- To investigate the transcriptional mechanisms of cellular responses to DNA damaging agents.
- To develop a sensitive assay for detecting DNA damage responses.
Main Methods:
- Developed seven reporter constructs using promoters/response elements from DNA damage-inducible genes (e.g., DNA polymerase beta, p53, gadd, c-fos).
- Integrated constructs into RKO human colon carcinoma cells, creating stable cell lines.
- Assembled cell lines into a 96-well microtiter plate for simultaneous compound exposure and CAT protein measurement (CAT-Tox (D) assay).
- Exposed cells to various DNA damaging agents (UVC, MMS, EMS, MNNG, DMN, mitomycin C, actinomycin D, hydroxyurea).
- Measured transcriptional responses via CAT protein accumulation using ELISA; validated with Northern and Western blot analysis for endogenous gene expression.
Main Results:
- The CAT-Tox (D) assay successfully measured transcriptional responses to diverse DNA damaging agents.
- ELISA-based CAT protein accumulation correlated with endogenous mRNA and protein levels.
- Demonstrated the assay's sensitivity and rapidity in detecting DNA damage responses.
Conclusions:
- The CAT-Tox (D) assay is a useful tool for the rapid and sensitive detection of DNA damaging agents in human cells.
- Early transcriptional responses measured by this assay provide insights into cellular responses to genotoxic stress.
- This assay facilitates the study of DNA damage response mechanisms.