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Molecular spectrum of mutations induced by 5-hydroxymethyl-2'-deoxyuridine in (CHO)-PL61 cells
1Department of Pathology, New York University Medical Center, NY, USA.
Abstract:
We have utilized (CHO)-PL61 cells to characterize the mutations produced in mammalian cells by exogenous treatment with the nucleoside 5-hydroxymethyl-2'-deoxyuridine (hmdUrd). HmdUrd is incorporated into DNA as a thymidine analogue and is removed by the repair enzyme hmUra-DNA glycosylase. PL61 cells are hprt(-) and contain adjacent single copies of the Escherichia coli gpt and neo genes (gpt+, neo+) separated by 2 kb, rendering the cells thioguanine sensitive (TGs) and geneticin resistant (G418r). Cells were exposed to hmdUrd and the colonies resistant to thioguanine or thioguanine and G418 were selected. Selection in thioguanine alone (TGr/gpt(-)) allows the growth of all gpt(-) mutants (small, intermediate and large deletions/insertions and point mutations) while selection in thioguanine and G418 (TGr/gpt(-), G418r/neo+) prevents survival of colonies containing vary large deletions of the gpt gene that include the neo gene. To confirm the types of mutation at the molecular level, the gpt gene was amplified from mutants' genomic DNA by PCR, and the amplified DNA was sequenced directly by the dideoxy method. Our study showed that 4 microM hmdUrd induced mutations to TGr/gpt(-) at a rate 3-4 times that of control, but showed no marked increase in mutation to TGr/gpt(-), G418r/neo+. The predominant type of hmdUrd induced mutation in the thioguanine resistant cells at the gpt locus was complete loss of the gpt gene resulting from a large deletion. Background mutations were generally point mutations or small insertion/deletion mutations. We propose that hmdUrd induces large/intermediate deletions as a major type of mutations in mammalian cells as a consequence of DNA repair, and not as a result of misincorporation or mispairing, suggesting that base excision repair by itself can lead to large deletion mutagenesis.
Insights
The nucleoside 5-hydroxymethyl-2'-deoxyuridine (hmdUrd) significantly increases large deletions in mammalian DNA. This suggests base excision repair can cause substantial DNA mutagenesis.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Mammalian cells possess DNA repair mechanisms to maintain genomic integrity.
- Nucleoside analogues can be incorporated into DNA, potentially leading to mutations.
- Base excision repair (BER) is a critical pathway for removing damaged DNA bases.
Purpose of the Study:
- To investigate the mutagenic potential of 5-hydroxymethyl-2 ahydro-deoxyuridine (hmdUrd) in mammalian cells.
- To characterize the types of mutations induced by hmdUrd exposure.
- To explore the role of DNA repair in hmdUrd-induced mutagenesis.
Main Methods:
- Utilized (CHO)-PL61 cells, a thioguanine-sensitive and geneticin-resistant cell line with reporter genes.
- Exposed cells to hmdUrd and selected for thioguanine-resistant mutants.
- Employed Polymerase Chain Reaction (PCR) and dideoxy sequencing to analyze mutations at the molecular level.
Main Results:
- hmdUrd treatment increased mutation rates to thioguanine resistance by 3-4 times compared to controls.
- The predominant mutation type induced by hmdUrd was the complete loss of the gpt gene via large deletions.
- Background mutations consisted mainly of point mutations or small insertion/deletion mutations.
Conclusions:
- hmdUrd primarily induces large/intermediate deletions in mammalian cells, likely as a consequence of DNA repair processes.
- This suggests that base excision repair, independent of misincorporation or mispairing, can lead to large deletion mutagenesis.
- The study highlights a novel mechanism of DNA mutagenesis mediated by DNA repair pathways.