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Generation and Purification of Human INO80 Chromatin Remodeling Complexes and Subcomplexes
Published on: October 23, 2014
The human homologue of yeast CRM1 is in a dynamic subcomplex with CAN/Nup214 and a novel nuclear pore component Nup88
M Fornerod1, J van Deursen, S van Baal
1Department of Genetics, St Jude Children's Research Hospital, Memphis, TN 38105, USA.
Abstract:
The oncogenic nucleoporin CAN/Nup214 is essential in vertebrate cells. Its depletion results in defective nuclear protein import, inhibition of messenger RNA export and cell cycle arrest. We recently found that CAN associates with proteins of 88 and 112 kDa, which we have now cloned and characterized. The 88 kDa protein is a novel nuclear pore complex (NPC) component, which we have named Nup88. Depletion of CAN from the NPC results in concomitant loss of Nup88, indicating that the localization of Nup88 to the NPC is dependent on CAN binding. The 112 kDa protein is the human homologue of yeast CRM1, a protein known to be required for maintenance of correct chromosome structure. This human CRM1 (hCRM1) localized to the NPC as well as to the nucleoplasm. Nuclear overexpression of the FG-repeat region of CAN, containing its hCRM1-interaction domain, resulted in depletion of hCRM1 from the NPC. In CAN-/- mouse embryos lacking CAN, hCRM1 remained in the nuclear envelope, suggesting that this protein can also bind to other repeat-containing nucleoporins. Lastly, hCRM1 shares a domain of significant homology with importin-beta, a cytoplasmic transport factor that interacts with nucleoporin repeat regions. We propose that hCRM1 is a soluble nuclear transport factor that interacts with the NPC.
Insights
The oncogenic nucleoporin CAN/Nup214 is crucial for nuclear pore complex (NPC) function. Its interaction with Nup88 and human CRM1 (hCRM1) is vital for nuclear transport and cell viability.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- The oncogenic nucleoporin CAN/Nup214 plays a critical role in vertebrate cell function.
- CAN/Nup214 depletion leads to nuclear protein import defects, mRNA export inhibition, and cell cycle arrest.
Purpose of the Study:
- To identify and characterize proteins associated with CAN/Nup214.
- To elucidate the functional relationship between CAN/Nup214, Nup88, and human CRM1 (hCRM1) in nuclear transport.
Main Methods:
- Protein identification and cloning of CAN/Nup214-associated proteins.
- Depletion studies using CAN/Nup214 knockdown.
- Localization studies of Nup88 and hCRM1.
- Analysis of CAN-/- mouse embryos.
Main Results:
- Identified and cloned an 88 kDa protein, Nup88, a novel NPC component whose localization depends on CAN/Nup214.
- Identified the 112 kDa protein as human CRM1 (hCRM1), a homolog of yeast CRM1, which localizes to the NPC and nucleoplasm.
- Demonstrated that CAN/Nup214 is essential for hCRM1's NPC localization; hCRM1 interacts with the FG-repeat region of CAN/Nup214 and shares homology with importin-beta.
Conclusions:
- CAN/Nup214 is essential for the NPC localization of Nup88 and hCRM1.
- hCRM1 functions as a soluble nuclear transport factor interacting with the NPC, potentially via repeat-containing nucleoporins.
- CAN/Nup214-Nup88 and CAN/Nup214-hCRM1 interactions are critical for nuclear transport and cellular integrity.
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