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Generation and Purification of Human INO80 Chromatin Remodeling Complexes and Subcomplexes
Published on: October 23, 2014
In vivo interaction of human MCM heterohexameric complexes with chromatin. Possible involvement of ATP
M Fujita1, T Kiyono, Y Hayashi
1Laboratory of Viral Oncology, Research Institute, Aichi Cancer Center, Chikusa-ku, Nagoya 464, Japan. mfujita@aichigw.aichi-cc.pref.aichi.jp
Abstract:
The MCM protein family, which consists of at least six members, has been implicated in the regulatory machinery causing DNA to replicate once in the S phase. Mammalian MCM proteins are present in the nucleus in two different forms, one extractable by nonionic detergents and the other resistant to such extraction. The latter is assumed to be tightly associated with nuclear structures and released at the time of initiation of replication. However, details of the mode of binding remain unclear. In the present study, we found that, in nonionic detergent-permeabilized nuclei, the association of human MCM (hMCM) proteins with them could be stabilized by the addition of ATP. The hMCMs bound to the nuclei in the presence of ATP were released by digestion with nucleases, suggesting that they are chromatin-associated. The nuclease-directed solubilization of the chromatin-bound hMCMs thus provided a means to analyze them as well as soluble hMCMs by co-immunoprecipitation. The results indicate that the six hMCM members exist as heterocomplexes, whether bound or unbound. We therefore propose that hMCM proteins may function in DNA replication as heterohexamers associated with chromatin and that ATP is possibly involved in the association. Nuclease digestion-immunoprecipitation techniques of the type described here should facilitate further elucidation of the mode of interaction between hMCMs and chromatin.
Insights
Human MCM (hMCM) proteins associate with chromatin during DNA replication, a binding stabilized by ATP. These proteins form heterocomplexes, suggesting a role as heterohexamers in replication initiation.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- The MCM protein family is crucial for regulating DNA replication during the S phase.
- Mammalian MCM proteins exist in the nucleus in detergent-extractable and resistant forms.
- The precise binding mechanism of MCM proteins to nuclear structures remains unclear.
Purpose of the Study:
- To investigate the association of human MCM (hMCM) proteins with nuclear structures.
- To elucidate the role of ATP in hMCM binding.
- To determine the complex formation of hMCM proteins.
Main Methods:
- Utilized nonionic detergent-permeabilized nuclei to study hMCM binding.
- Employed ATP addition to stabilize hMCM-nuclear association.
- Used nuclease digestion followed by co-immunoprecipitation to analyze hMCM complexes.
Main Results:
- ATP addition stabilized the association of hMCM proteins with nuclei.
- Nuclease digestion released ATP-stabilized hMCMs, indicating chromatin association.
- Co-immunoprecipitation revealed that the six hMCM members form heterocomplexes.
Conclusions:
- hMCM proteins likely function as chromatin-associated heterohexamers in DNA replication.
- ATP may play a role in mediating the association of hMCMs with chromatin.
- Nuclease digestion-immunoprecipitation is a valuable technique for studying hMCM-chromatin interactions.
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