Isolation and characterization of cDNA encoding mouse RNA polymerase II subunit RPB14
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Published on: September 30, 2016
1Department of Biochemistry, Saitama Medical School, Iruma-gun, Japan.
Abstract:
By means of the yeast two-hybrid system using the 40-kDa subunit of mouse RNA polymerase I, mRPA40, as the bait, we isolated a mouse cDNA which encoded a protein with significant homology in amino acid sequence to the 12.5-kDa subunit of Saccharomyces cerevisiae RNA polymerase II, B12.5 (RPB11). Specific antibody raised against the recombinant protein that was derived from the cDNA reacted with a 14-kDa polypeptide in highly purified mammalian RNA polymerase II and did not react with any subunit of RNA polymerase I or III. Moreover, the antibody co-immunoprecipitated the largest subunit of mouse RNA polymerase II. These results provide biochemical evidence that the cDNA isolated, named mRPB14, encodes a specific subunit of RNA polymerase II, and indicate that the subunit organization of the enzyme is conserved between yeast and mouse. A possible role of the alpha-motif [Dequard-Chablat, M., Riva, M., Carles, C. and Sentenac, A., J. Biol. Chem. 266 (1991) 15300-15307] in the protein-protein interaction between mRPA40 and mRPB14 is also discussed.
Insights
Researchers identified a new mouse RNA polymerase II subunit, mRPB14, using yeast two-hybrid screening. This finding suggests conserved enzyme organization between yeast and mammals.
Area of Science:
- Molecular Biology
- Biochemistry
Background:
- RNA polymerase I (Pol I) and RNA polymerase II (Pol II) are crucial enzymes for transcription.
- Understanding the subunit composition of these polymerases is key to elucidating their function.
Purpose of the Study:
- To identify novel subunits of mouse RNA polymerase II.
- To investigate the conservation of RNA polymerase subunit organization between yeast and mammals.
Main Methods:
- Yeast two-hybrid system was employed using the 40-kDa subunit of mouse RNA polymerase I (mRPA40) as bait.
- A specific antibody was generated against the isolated cDNA product (mRPB14).
- Immunoprecipitation assays were performed using the mRPB14 antibody.
Main Results:
- A mouse cDNA, mRPB14, was isolated, encoding a protein homologous to yeast RNA polymerase II subunit B12.5.
- The anti-mRPB14 antibody specifically recognized a 14-kDa polypeptide in purified mammalian RNA polymerase II.
- The antibody co-immunoprecipitated the largest subunit of mouse RNA polymerase II, confirming mRPB14's association.
Conclusions:
- Biochemical evidence confirms mRPB14 as a specific subunit of mouse RNA polymerase II.
- The study indicates conserved subunit organization of RNA polymerase between yeast and mouse.
- The potential role of the alpha-motif in protein-protein interactions within RNA polymerase is suggested.
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