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Updated: Sep 15, 2026

Conjugative Mating Assays for Sequence-specific Analysis of Transfer Proteins Involved in Bacterial Conjugation
Published on: January 4, 2017
Description of a novel plasmid replicative origin from a genetically distinct family of conjugative plasmids
C A Viegas1, A K Lilley, K Bruce
1Natural Environment Research Council, Institute of Virology and Environmental Microbiology, Oxford, UK.
Abstract:
A novel replicative origin (oriV) from a conjugative, mercury resistance plasmid (pQBR11, 304 kbp) has been cloned and sequenced. Homology to the pQBR11 oriV-containing 3.55 kbp BamHI fragment (pCV1200) was restricted to one of five genetically distinct classes (group I) of narrow host range, mega-plasmids that persist as a genetic component of the pseudomonad community indigenous to the microflora of sugar beet. The oriV of pQBR11 was located within a unique sequence of 300 bp which initiated the replication of pUC derived suicide vectors in Pseudomonas putida UWC1. The limited size of the DNA sequence required to initiate replication, and the presence of two 15/16 bp directly repeated motifs, indicate that this group of mega-plasmids contain a single origin of replication, which initiates replication via a host-polymerase dependent rolling circle mechanism.
Insights
Researchers identified a novel replication origin (oriV) in a large mercury resistance plasmid. This origin initiates replication in Pseudomonas species, offering insights into plasmid maintenance in bacterial communities.
Area of Science:
- Molecular Biology
- Microbiology
- Genetics
Background:
- Conjugative plasmids play a crucial role in bacterial adaptation and evolution.
- Understanding plasmid replication mechanisms is vital for controlling their persistence in microbial communities.
- Mega-plasmids, like pQBR11, are significant genetic elements in pseudomonad populations.
Purpose of the Study:
- To clone and sequence a novel replicative origin (oriV) from the mercury resistance plasmid pQBR11.
- To investigate the functional role of this oriV in plasmid replication within Pseudomonas species.
- To determine the characteristics of the oriV sequence and its replication mechanism.
Main Methods:
- Cloning and sequencing of the oriV region from plasmid pQBR11.
- Functional analysis using pUC-derived suicide vectors in Pseudomonas putida UWC1.
- Sequence analysis to identify conserved motifs and regulatory elements.
Main Results:
- A novel oriV was identified within a 300 bp unique sequence of pQBR11.
- This oriV initiated replication of suicide vectors in Pseudomonas putida UWC1.
- The oriV contained two directly repeated motifs, suggesting a single origin of replication.
Conclusions:
- The identified oriV is functional and sufficient for initiating replication in Pseudomonas.
- The oriV likely utilizes a host-polymerase dependent rolling circle mechanism for replication.
- This finding contributes to understanding the persistence of large plasmids in bacterial communities.
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