Description of a novel plasmid replicative origin from a genetically distinct family of conjugative plasmids

C A Viegas1, A K Lilley, K Bruce

  • 1Natural Environment Research Council, Institute of Virology and Environmental Microbiology, Oxford, UK.

Insights

Researchers identified a novel replication origin (oriV) in a large mercury resistance plasmid. This origin initiates replication in Pseudomonas species, offering insights into plasmid maintenance in bacterial communities.

Area of Science:

  • Molecular Biology
  • Microbiology
  • Genetics

Background:

  • Conjugative plasmids play a crucial role in bacterial adaptation and evolution.
  • Understanding plasmid replication mechanisms is vital for controlling their persistence in microbial communities.
  • Mega-plasmids, like pQBR11, are significant genetic elements in pseudomonad populations.

Purpose of the Study:

  • To clone and sequence a novel replicative origin (oriV) from the mercury resistance plasmid pQBR11.
  • To investigate the functional role of this oriV in plasmid replication within Pseudomonas species.
  • To determine the characteristics of the oriV sequence and its replication mechanism.

Main Methods:

  • Cloning and sequencing of the oriV region from plasmid pQBR11.
  • Functional analysis using pUC-derived suicide vectors in Pseudomonas putida UWC1.
  • Sequence analysis to identify conserved motifs and regulatory elements.

Main Results:

  • A novel oriV was identified within a 300 bp unique sequence of pQBR11.
  • This oriV initiated replication of suicide vectors in Pseudomonas putida UWC1.
  • The oriV contained two directly repeated motifs, suggesting a single origin of replication.

Conclusions:

  • The identified oriV is functional and sufficient for initiating replication in Pseudomonas.
  • The oriV likely utilizes a host-polymerase dependent rolling circle mechanism for replication.
  • This finding contributes to understanding the persistence of large plasmids in bacterial communities.

Related Concept Videos

Genomic DNA in Prokaryotes00:46

Genomic DNA in Prokaryotes

The genome of most prokaryotic organisms consists of double-stranded DNA organized into one circular chromosome in a region of cytoplasm called the nucleoid. The chromosome is tightly wound, or supercoiled, for efficient storage. Prokaryotes also contain other circular pieces of DNA called plasmids. These plasmids are smaller than the chromosome and often carry genes that confer adaptive functions, such as antibiotic resistance.
Genomic Diversity in Bacteria
Although bacterial genomes are much...
Bacterial Transformation01:33

Bacterial Transformation

In 1928, bacteriologist Frederick Griffith worked on a vaccine for pneumonia, which is caused by Streptococcus pneumoniae bacteria. Griffith studied two pneumonia strains in mice: one pathogenic and one non-pathogenic. Only the pathogenic strain killed host mice.Griffith made an unexpected discovery when he killed the pathogenic strain and mixed its remains with the live, non-pathogenic strain. Not only did the mixture kill host mice, but it also contained living pathogenic bacteria that...
Plasmids01:28

Plasmids

Plasmids are extrachromosomal DNA molecules found in bacteria, archaea, and some eukaryotic microbes like yeast. These small, circular DNA structures typically contain fewer than 30 genes, although some may exist linearly. Plasmids vary in their number within a cell, known as copy number. Single-copy plasmids are present in one copy per cell and multi-copy plasmids are present in multiple copies, reaching over 100 copies per cell.Plasmids usually replicate independently of the chromosomal DNA...
Conjugation01:19

Conjugation

Conjugation is a form of horizontal gene transfer that primarily occurs in bacteria and some archaea, promoting genetic diversity and adaptation. Bacteria can acquire resistance genes through conjugative plasmids, allowing them to survive antibiotic treatments that would otherwise be lethal. This process involves direct contact between cells through specialized structures such as the sex pilus and is mediated by conjugative plasmids, including the F (fertility) factor.Conjugation requires...
Mechanism of Conjugation01:19

Mechanism of Conjugation

Bacterial conjugation is a mechanism of horizontal gene transfer that enables the exchange of genetic material between bacterial cells through direct contact. This process is facilitated by a donor cell carrying a conjugative plasmid, which encodes genes necessary for pilus formation, DNA replication, and transfer. The conjugative plasmid plays a central role in initiating and executing the transfer of genetic material.The tra region of the conjugative plasmid encodes proteins responsible for...
Bacterial Phylum Tenericutes01:24

Bacterial Phylum Tenericutes

The phylum Tenericutes, which includes the single class Mollicutes, comprises bacteria that lack cell walls. The term "Mollicutes" derives from the Latin word mollis, meaning "soft." These organisms are among the smallest known and are commonly referred to as mycoplasmas due to the prominence of the genus Mycoplasma, which includes well-known human pathogens. Despite their inability to stain gram-positively (a result of their lack of cell walls), mycoplasmas are phylogenetically related to the...