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Structural and functional analysis of a mutant Ras protein that is insensitive to nitric oxide activation
H R Mott1, J W Carpenter, S L Campbell
1Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill 27599, USA.
Abstract:
Ras proteins cycle between active, guanosine triphosphate (GTP)-bound and inactive, guanosine diphospate (GDP)-bound states to mediate signal transduction pathways that promote cell growth and differentiation. It is believed that the major physiological mechanism for Ras activation is via interaction with guanine-nucleotide exchange factors (GEFs). This interaction is highly regulated and results in elevated levels of Ras-GTP by facilitating GDP dissociation. Recently, a novel mechanism of Ras activation has been proposed, whereby nitric oxide (NO) modification of Cys-118, like GEF interaction, populates Ras in its biologically active form by stimulating GDP release. Here, we describe characterization of a variant of Ras, C118S, that is insensitive to NO modification. We have measured the GTPase activity and the GDP dissociation rate of the C118S mutant and found them to be similar to wild-type Ras. We have also analyzed the structure of this mutant using multidimensional heteronuclear NMR methods. Analysis of chemical shifts and distance restraints demonstrates that this mutation has not disrupted the structure of the protein. These results suggest that NO modification of Cys-118 may not alter Ras structure and that the basis of Ras activation by NO is destabilization of a crucial interaction between residues in the GDP-binding pocket and the nucleotide. We have also found that this mutant is a more stable form of Ras at concentrations required for NMR studies, probably due to the removal of a surface-accessible cysteine residue. This stable variant may facilitate structural and biochemical investigations of Ras and other guanine-nucleotide-binding proteins containing a cysteine at this position.
Insights
Nitric oxide (NO) activates Ras proteins by modifying Cys-118, promoting GDP release. A C118S mutant shows NO insensitivity, suggesting NO’s role in Ras activation involves destabilizing nucleotide interactions rather than altering protein structure.
Area of Science:
- Molecular Biology
- Cell Signaling
- Protein Biochemistry
Background:
- Ras proteins are key regulators of cell growth and differentiation, cycling between GTP-bound (active) and GDP-bound (inactive) states.
- Guanine nucleotide exchange factors (GEFs) are the primary activators of Ras, facilitating GDP release and GTP binding.
- Nitric oxide (NO) has been proposed to activate Ras via modification of Cysteine-118 (Cys-118), stimulating GDP release.
Purpose of the Study:
- To characterize a Ras variant (C118S) insensitive to NO modification.
- To investigate the structural and functional impact of NO modification at Cys-118 on Ras activity.
- To explore the potential of the C118S mutant as a stable tool for structural studies.
Main Methods:
- Site-directed mutagenesis to create the C118S Ras variant.
- Biochemical assays to measure GTPase activity and GDP dissociation rates.
- Multidimensional heteronuclear Nuclear Magnetic Resonance (NMR) spectroscopy to analyze protein structure.
Main Results:
- The C118S mutant exhibited GTPase activity and GDP dissociation rates comparable to wild-type Ras.
- NMR analysis confirmed that the C118S mutation did not disrupt the overall protein structure.
- These findings suggest NO-mediated Ras activation may stem from destabilizing nucleotide-pocket interactions, not structural changes.
Conclusions:
- NO modification of Cys-118 does not appear to alter Ras protein structure.
- Ras activation by NO likely involves disruption of interactions within the GDP-binding pocket.
- The C118S Ras mutant offers enhanced stability for structural and biochemical investigations.