Related Experiment Video
Updated: Aug 7, 2026

HOX Loci Focused CRISPR/sgRNA Library Screening Identifying Critical CTCF Boundaries
Published on: March 31, 2019
The binding of a Fos/Jun heterodimer can completely disrupt the structure of a nucleosome
1Division of Biochemistry, The John Curtin School of Medical Research, The Australian National University, Canberra.
Abstract:
An important first step in the chromatin remodelling process is the initial binding of a transcriptional activator to a nucleosomal template. We have investigated the ability of Fos/Jun (a transcriptional activator involved in the signal transduction pathway) to interact with its cognate binding site located in the promoter region of the mouse fos-related antigen-2 (fra-2) promoter, when this site was reconstituted into a nucleosome. Two different nucleosome assembly systems were employed to assemble principally non-acetylated or acetylated nucleosomes. The ability of Fos/Jun to interact with an acetylated or an unacetylated nucleosome differed markedly. Fos/Jun bound to an unacetylated nucleosome with only a 4- to 5-fold reduction in DNA binding affinity compared with naked DNA. Strikingly, the binding of Fos/Jun to a single high-affinity site incorporated into an acetylated nucleosome resulted in the complete disruption of nucleosomal structure without histone displacement. Moreover, this disruption was sufficient to facilitate the subsequent binding of a second transcription factor.
Insights
The Fos/Jun transcriptional activator binds differently to acetylated and unacetylated nucleosomes. Acetylated nucleosomes disrupt their structure upon Fos/Jun binding, enabling further transcription factor access.
Area of Science:
- Molecular Biology
- Epigenetics
- Gene Regulation
Background:
- Chromatin remodeling is crucial for gene regulation.
- Transcriptional activators initiate gene expression by binding DNA.
- Nucleosomes, DNA wrapped around histones, pose a barrier to transcription factor binding.
Purpose of the Study:
- To investigate the interaction of Fos/Jun with its binding site within a nucleosomal template.
- To determine how nucleosome acetylation affects Fos/Jun binding affinity and nucleosome structure.
- To assess the impact of Fos/Jun binding on subsequent transcription factor accessibility.
Main Methods:
- Reconstitution of nucleosomes with acetylated and non-acetylated histone variants.
- Electrophoretic mobility shift assays (EMSAs) to assess DNA binding.
- Analysis of nucleosome structural integrity upon transcription factor binding.
Main Results:
- Fos/Jun binding affinity to unacetylated nucleosomes was reduced only 4-5 fold compared to naked DNA.
- Binding of Fos/Jun to acetylated nucleosomes caused complete disruption of the nucleosome structure.
- Histone displacement was not observed during nucleosome disruption.
- Nucleosome disruption by Fos/Jun facilitated the binding of a second transcription factor.
Conclusions:
- Nucleosome acetylation status significantly modulates the interaction of Fos/Jun with its DNA binding site.
- Acetylated nucleosomes are more susceptible to disruption by Fos/Jun, leading to altered chromatin structure.
- This disruption mechanism may play a role in facilitating the assembly of transcription initiation complexes.
More Related Videos
Related Concept Videos
The Nucleosome Core Particle
The paradox
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their main responsibility is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. While on the other hand, they must allow polymerase enzymes to access DNA...
Nucleosome Remodeling
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Cooperative Binding of Transcription Regulators
Cooperative Binding of Transcription Regulators
The Nucleosome
In a chromosome, DNA is wound twice around a protein complex called a histone octamer core, which consists of 8 histone proteins. This...
The Nucleosome Core Particle
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...

