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Updated: Aug 12, 2026

Implementation of In Vitro Drug Resistance Assays: Maximizing the Potential for Uncovering Clinically Relevant Resistance Mechanisms
Published on: December 9, 2015
[Mechanisms of endogenous drug resistance acquisition by spontaneous chromosomal gene mutation]
1Department of Bacteriology, Juntendo University.
Abstract:
Endogenous resistance in bacteria is caused by a change or loss of function and generally genetically recessive. However, this type of resistance acquisition are now prevalent in clinical setting. Chromosomal genes that afford endogenous resistance are the genes correlated with the target of the drug, the drug inactivating enzymes, and permeability of the molecules including the antibacterial agents. Endogenous alteration of the drug target are mediated by the spontaneous mutation of their structural gene. This mutation provides much lower affinity of the drugs for the target. Gene expression of the inactivating enzymes, such as class C beta-lactamase, is generally regulated by regulatory genes. Spontaneous mutations in the regulatory genes cause constitutive enzyme production and provides the resistant to the agent which is usually stable for such enzymes. Spontaneous mutation in the structural gene gives the enzyme extra-spectrum substrate specificity, like ESBL (Extra-Spectrum-beta-Lactamase). Expression of structural genes encoding the permeability systems are also regulated by some regulatory genes. The spontaneous mutation of the regulatory genes reduce an amount of porin protein. This mutation causes much lower influx of the drug in the cell. Spontaneous mutation in promoter region of the structural gene of efflux protein was observed. This mutation raised the gene transcription and overproduced efflux protein. This protein progresses the drug efflux from the cell.
Insights
Bacterial resistance arises from genetic changes affecting drug targets, enzymes, or permeability. Understanding these mechanisms, like mutations in regulatory genes, is crucial for combating antibiotic resistance.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Context:
- Endogenous antibiotic resistance in bacteria is increasingly prevalent in clinical settings.
- This resistance stems from genetic alterations in chromosomal genes.
- These genes are associated with drug targets, drug-inactivating enzymes, and molecule permeability.
Purpose:
- To elucidate the genetic mechanisms underlying endogenous bacterial resistance.
- To explain how spontaneous mutations in bacterial genes lead to reduced drug efficacy.
Summary:
- Endogenous resistance develops through genetic changes, often recessive, affecting drug targets, inactivating enzymes, or permeability.
- Mutations in drug target genes decrease drug affinity.
- Mutations in regulatory genes can lead to constitutive production of inactivating enzymes (e.g., beta-lactamases, including Extra-Spectrum-beta-Lactamase) or altered permeability (reduced porin influx, increased efflux).
Impact:
- Provides insights into the molecular basis of antibiotic resistance.
- Highlights the role of spontaneous mutations in bacterial adaptation and survival.
- Informs strategies for developing new antimicrobial therapies and combating resistance spread.
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