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Updated: Aug 10, 2026

Screening for Amyloid Aggregation by Semi-Denaturing Detergent-Agarose Gel Electrophoresis
Published on: July 16, 2008
Prion-inducing domain 2-114 of yeast Sup35 protein transforms in vitro into amyloid-like filaments
C Y King1, P Tittmann, H Gross
1Institut für Molekularbiologie und Biophysik, Eidgenössische Technische Hochschule, CH-8093 Zürich, Switzerland.
Abstract:
The yeast non-Mendelian genetic factor [PSI], which enhances the efficiency of tRNA-mediated nonsense suppression in Saccharomyces cerevisiae, is thought to be an abnormal cellular isoform of the Sup35 protein. Genetic studies have established that the N-terminal part of the Sup35 protein is sufficient for the genesis as well as the maintenance of [PSI]. Here we demonstrate that the N-terminal polypeptide fragment consisting of residues 2-114 of Sup35p, Sup35pN, spontaneously aggregates to form thin filaments in vitro. The filaments show a beta-sheet-type circular dichroism spectrum, exhibit increased protease resistance, and show amyloid-like optical properties. It is further shown that filament growth in freshly prepared Sup35pN solutions can be induced by seeding with a dilute suspension of preformed filaments. These results suggest that the abnormal cellular isoform of Sup35p is an amyloid-like aggregate and further indicate that seeding might be responsible for the maintenance of the [PSI] element in vivo.
Insights
The yeast [PSI] factor, an abnormal Sup35 protein isoform, forms amyloid-like filaments. Seeding of these filaments may explain how the [PSI] factor is maintained in cells.
Area of Science:
- Biochemistry
- Molecular Biology
- Yeast Genetics
Background:
- The yeast non-Mendelian genetic factor [PSI] enhances tRNA-mediated nonsense suppression.
- It is associated with an abnormal cellular isoform of the Sup35 protein.
- The N-terminal region of Sup35p is crucial for [PSI] genesis and maintenance.
Purpose of the Study:
- To investigate the in vitro aggregation properties of the Sup35 N-terminal fragment.
- To determine if the Sup35 N-terminal fragment forms amyloid-like structures.
- To explore the potential role of seeding in the maintenance of the [PSI] factor.
Main Methods:
- In vitro aggregation assays of the Sup35 N-terminal fragment (Sup35pN).
- Circular dichroism spectroscopy to analyze secondary structure.
- Protease resistance assays.
- Amyloid-like property assessment.
- Seeding experiments to induce filament growth.
Main Results:
- Sup35pN spontaneously forms thin filaments in vitro.
- These filaments exhibit beta-sheet structure, increased protease resistance, and amyloid-like optical properties.
- Filament formation can be seeded by preformed aggregates, promoting further growth.
Conclusions:
- The abnormal cellular isoform of Sup35p associated with the [PSI] factor is likely an amyloid-like aggregate.
- Seeding of Sup35p aggregates may be the mechanism responsible for maintaining the [PSI] element in vivo.
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