Related Experiment Video
Updated: Jul 12, 2026

08:44
Generation and Purification of Human INO80 Chromatin Remodeling Complexes and Subcomplexes
Published on: October 23, 2014
ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factor
1Department of Biology, University of California, San Diego, La Jolla 92093-0347, USA.
Cell
|July 11, 1997
Summary
We purified and characterized ACF, an ATP-dependent factor essential for chromatin assembly and remodeling. ACF facilitates nucleosome array formation and modulates chromatin structure, suggesting a catalytic role in transcriptional activation.
Area of Science:
- Molecular Biology
- Chromatin Dynamics
- Gene Regulation
Background:
- Chromatin structure plays a crucial role in regulating gene expression.
- ATP-utilizing chromatin assembly and remodeling factors are key players in maintaining and altering chromatin architecture.
- ISWI-containing factors, such as NURF, are known to be involved in chromatin organization.
Purpose of the Study:
- To purify and characterize a novel ATP-utilizing chromatin assembly and remodeling factor, termed ACF.
- To investigate the role of ACF in ATP-dependent chromatin assembly and remodeling processes.
- To determine if ACF functions catalytically in chromatin dynamics and transcriptional activation.
Main Methods:
- Purification of the ACF multisubunit factor.
- Biochemical assays for chromatin assembly using purified ACF and histone chaperones (NAP-1, CAF-1).
- Chromatin remodeling assays to assess ACF's effect on internucleosomal spacing and promoter-specific nucleosome reconfiguration (using Gal4-VP16).
Main Results:
- ACF was purified and characterized as a multisubunit factor containing ISWI protein, distinct from NURF.
- Purified ACF, with a histone chaperone, efficiently assembled periodic nucleosome arrays in an ATP-dependent manner.
- ACF demonstrated ATP-dependent modulation of internucleosomal spacing and mediated promoter-specific nucleosome reconfiguration.
Conclusions:
- ACF is a novel ATP-utilizing factor crucial for both chromatin assembly and remodeling.
- ACF acts catalytically in nucleosome array formation and remodeling.
- ACF's functions suggest a significant role in the nucleosome reconfiguration required for transcriptional activation.
Related Concept Videos
Nucleosome Remodeling
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Histone Variants at the Centromere
Histone variants are the histone proteins with structural and sequence variations. These variants may be regarded as “mutant” forms that replace their canonical histone counterparts in the nucleosomes. Specific post-translational modifications on the histone variants enable further chromatin complexity and regulate tissue-specific gene expression. The most common histone variants are from histone H2A, H2B, and linker histone H1 families. However, several variants of histone H3 variants are also...
Inheritance of Chromatin Structures
Epigenetics is the study of inherited changes in a cell's phenotype without changing the DNA sequences. It provides a form of memory for the differential gene expression pattern to maintain cell lineage, position-effect variegation, dosage compensation, and maintenance of chromatin structures such as telomeres and centromeres. For example, the structure and location of the centromere on chromosomes are epigenetically inherited. Its functionality is not dictated or ensured by the underlying DNA...
Cytoskeletal Accessory Proteins
The cytoskeleton is an essential cell component that plays several structural and functional roles. However, the filaments that make up the cytoskeleton cannot function independently and depend on the accessory or ancillary proteins to effectively carry out their function. Accessory proteins associate with cytoskeletal filaments and their monomers, aiding filament formation and function. They also help in the cross-communication among cytoskeletal filaments. Cytoskeletal accessory proteins are...
Spindle Assembly
Spindle assembly occurs through three, often coexisting, pathways – the centrosome-mediated pathway, the chromatin-mediated pathway, and the microtubule-mediated pathway – collectively contributing to form a robust spindle apparatus.
In most cells, centrosomes are the primary microtubule nucleation centers. In the centrosome-mediated pathway, the G2-prophase transition triggers centrosome maturation and increased microtubule nucleation. Progressive nucleation results in a microtubule array...
In most cells, centrosomes are the primary microtubule nucleation centers. In the centrosome-mediated pathway, the G2-prophase transition triggers centrosome maturation and increased microtubule nucleation. Progressive nucleation results in a microtubule array...
Chromatin Modification in iPS Cells
Chromatin modification alters gene expression; therefore, scientists can add histone-modifying enzymes, histone variants, and chromatin remodeling complexes to somatic cells to aid reprogramming into pluripotent stem (iPS) cells.
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...

