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Detection of Viral RNA by Fluorescence in situ Hybridization (FISH)
Published on: May 5, 2012
Site-specific phosphorylation of the human immunodeficiency virus type-1 Rev protein accelerates formation of an
D E Fouts1, H L True, K A Cengel
1Department of Microbiology and College of Medicine, University of Illinois at Urbana-Champaign, USA.
Abstract:
Phosphorylation is important in the regulation of many cellular processes, yet the precise role of protein phosphorylation for many RNA-binding protein substrates remains obscure. In this report, we demonstrate that phosphorylation of a recombinant human immunodeficiency virus type-1 Rev protein promotes rapid formation of an efficient RNA-binding state. The apparent dissociation constant for ligand binding is enhanced 7-fold for the protein following phosphorylation; however, phosphate addition leads to a 1. 6-fold decrease in RNA ligand-protein complex stability. RNA ligand binding stimulates slow formation of an equally competent binding state for the unphosphorylated protein, indicating that the addition of phosphate or ligand binding promotes a similar conformational change in Rev. Phosphorylation directly alters the conformation of Rev, as revealed by modification experiments that monitor the solvent accessibility of cysteines in the protein. These biochemical properties are attributed to the addition of phosphate at one of two serine residues (Ser-54 or Ser-56) that lie within the multimerization domain adjacent to the RNA-binding helix. Glutaraldehyde-mediated cross-linking experiments revealed that phosphorylation of Rev does not affect Rev multimerization activity. The Rev protein from the less pathogenic HIV-2 isolate lacks this phosphorylation site in the amino acid sequence; thus, the described biochemical properties of the phosphorylated protein may contribute to Rev activity and possibly to HIV-1 virulence during natural infection.
Insights
Phosphorylation of the human immunodeficiency virus type-1 Rev protein enhances its RNA-binding ability. This modification alters Rev protein conformation, potentially influencing HIV-1 virulence.
Area of Science:
- Molecular Biology
- Virology
- Biochemistry
Background:
- Protein phosphorylation is crucial for cellular regulation, but its role in RNA-binding proteins is often unclear.
- The human immunodeficiency virus type-1 Rev protein regulates viral RNA processing and export.
Purpose of the Study:
- To investigate the impact of phosphorylation on the RNA-binding properties of the HIV-1 Rev protein.
- To elucidate the conformational changes induced by phosphorylation in Rev protein.
Main Methods:
- Recombinant protein expression and purification.
- RNA binding assays (dissociation constant and complex stability measurements).
- Chemical modification experiments (cysteine accessibility) and cross-linking studies.
Main Results:
- Phosphorylation significantly enhances the rate of RNA binding by the Rev protein.
- Phosphate addition increases the apparent dissociation constant by 7-fold but decreases complex stability by 1.6-fold.
- Phosphorylation induces conformational changes in Rev protein, independent of its multimerization activity.
Conclusions:
- Phosphorylation at Ser-54 or Ser-56 alters Rev protein conformation, promoting efficient RNA binding.
- These phosphorylation-dependent biochemical properties may contribute to HIV-1 Rev activity and viral virulence.
- The absence of this phosphorylation site in HIV-2 Rev suggests a role in HIV-1 pathogenesis.
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