Related Experiment Videos
Human microsomal epoxide hydrolase: 5'-flanking region genetic polymorphisms
S Raaka1, C Hassett, C J Omiencinski
1Department of Environmental Health, University of Washington, Seattle 98105-6099, USA.
Carcinogenesis
|April 3, 1998
Summary
Genetic variations in the human microsomal epoxide hydrolase (mEH) gene
Area of Science:
- Biochemistry
- Genetics
- Toxicology
Background:
- Microsomal epoxide hydrolase (mEH) metabolizes harmful epoxides from environmental toxins.
- Enzymatic activity of mEH varies significantly across individuals and cell types.
- Genetic polymorphisms in the mEH gene are known to influence its functional expression.
Purpose of the Study:
- To identify and characterize novel polymorphic sites in the upstream regulatory region of the human mEH gene.
- To investigate the functional impact of these polymorphisms on mEH gene transcription and activity.
Main Methods:
- Single strand conformational polymorphism (SSCP) analysis and direct DNA sequencing were employed to identify polymorphisms.
- Allelic frequencies and linkage disequilibrium were assessed in a cohort of 51 individuals.
- Reporter gene assays in HepG2 cells were used to evaluate the functional significance of identified nucleotide substitutions.
Main Results:
- Seven novel polymorphic sites were identified in the 5' flanking region of the mEH gene (-743 to +185 bp).
- Certain identified polymorphisms demonstrated the ability to differentially regulate mEH gene transcription.
- Individual nucleotide substitutions could alter reporter gene activity by up to approximately 30%.
Conclusions:
- Genetic variations within the 5' flanking sequence of the mEH gene contribute to population-level differences in mEH functional expression.
- These findings enhance our understanding of the genetic basis for inter-individual variability in xenobiotic metabolism.
- The identified polymorphisms may have implications for susceptibility to diseases associated with exposure to polyaromatic hydrocarbons.