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Analysis of CDKN2A, CDKN2B, CDKN2C, and cyclin Ds gene status in hepatoblastoma
A Iolascon1, L Giordani, A Moretti
1Department di Biomedicina dell'Età Evolutiva, University of Bari, Italy.
Abstract:
The status and the expression of cyclin-dependent kinase inhibitor A (CDKN2A) family genes, named CDKN2A, CDKN2B, and CDKN2C and of cyclin Ds (D1, D2, and D3) genes were investigated in 14 cases of human hepatoblastomas. These genes were selected because: 1) CDKN2A and CDKN2B are very frequently inactivated in human cancers; 2) cyclin Ds are overexpressed in several tumors and 3) CDKN2A is posttranscriptionally silenced in hepatocellular carcinomas. Structural analysis of the CDKN2A, CDKN2B, and CDKN2C genes in hepatoblastoma cases showed the absence of deletions and/or point mutations. Moreover, a detailed investigation of loss of heterozygosity at 9p21 and 1p32 (the chromosomal regions where CDKN2A genes are located) rules out the possible loss of one allele. Messenger RNA (mRNA) analysis showed that CDKN2C is expressed in all hepatoblastoma samples studied, while both CDKN2A and CDKN2B genes are not transcribed in the cancer specimens as well as in the matched normal liver tissues. Interestingly, an alternative mRNA expressed by the CDKN2A gene (beta-transcript) is detectable in 100% of the samples investigated. The analysis of cyclin D genes expression revealed that cyclin D1 is highly transcribed in normal hepatic tissue while cyclin D2 or D3 genes were extensively expressed in the matched transformed samples. Investigation at protein level confirmed the data obtained on RNA analysis. Indeed, p16INK4A and p15INK4B (products of expression of CDKN2A and CDKN2B respectively) were not observable while pl8INK4C (which is codified by CDKN2C) was clearly detectable in the samples analyzed. Moreover, a noticeable decrease of cyclin D1 content and increase of cyclin D3 level were observable in tumor tissues versus normal counterparts. Our findings demonstrated the following: 1) CDKN2A, CDKN2B, and CDKN2C genes are structurally unmodified in human hepatoblastoma, and 2) CDKN2A (alpha-transcript) and CDKN2B are transcriptionally silenced in normal liver whereas CDKN2A (beta-transcript) and CDKN2C were clearly expressed. Finally, a clear shift in cyclin D type expression was observable during malignant transformation. These results show that CDKN2A gene family alterations are not involved in hepatoblastoma development, whereas changes in cyclin D types might play a role in this type of tumor. Furthermore, a highly regulated expression of CDKN2A seems to occur in normal hepatic tissue.
Insights
Alterations in CDKN2A gene family are not involved in hepatoblastoma development. However, changes in cyclin D gene expression, specifically a shift from cyclin D1 to D2 or D3, may play a role in this cancer.
Area of Science:
- Molecular Biology
- Oncology
- Genetics
Background:
- The cyclin-dependent kinase inhibitor A (CDKN2A) family genes (CDKN2A, CDKN2B, CDKN2C) and cyclin D genes (D1, D2, D3) are critical in cell cycle regulation.
- CDKN2A and CDKN2B are frequently inactivated in cancers, while cyclin D genes are often overexpressed.
- CDKN2A is known to be post-transcriptionally silenced in hepatocellular carcinomas.
Purpose of the Study:
- To investigate the status and expression of CDKN2A family genes and cyclin D genes in human hepatoblastomas.
- To determine if structural alterations or transcriptional silencing of CDKN2A, CDKN2B, and CDKN2C are involved in hepatoblastoma development.
- To analyze the expression patterns of cyclin D1, D2, and D3 in hepatoblastoma and normal liver tissues.
Main Methods:
- Structural analysis of CDKN2A, CDKN2B, and CDKN2C genes in 14 hepatoblastoma cases.
- Loss of heterozygosity analysis at chromosomal regions 9p21 and 1p32.
- Messenger RNA (mRNA) analysis to assess gene transcription.
- Protein level investigation of CDKN2A and cyclin D family members.
Main Results:
- No deletions or point mutations were found in CDKN2A, CDKN2B, and CDKN2C genes; loss of heterozygosity was ruled out.
- CDKN2A (alpha-transcript) and CDKN2B were transcriptionally silenced in both hepatoblastoma and normal liver tissues.
- CDKN2C was expressed in all hepatoblastoma samples, and an alternative CDKN2A (beta-transcript) was detected in 100% of samples.
- Cyclin D1 was highly transcribed in normal liver, while cyclin D2 or D3 were extensively expressed in hepatoblastoma.
- Protein analysis confirmed the absence of p16INK4A and p15INK4B, presence of p18INK4C, decreased cyclin D1, and increased cyclin D3 in tumors.
Conclusions:
- CDKN2A gene family alterations are not implicated in human hepatoblastoma development.
- Transcriptional silencing of CDKN2A (alpha-transcript) and CDKN2B occurs in normal liver tissue.
- CDKN2A (beta-transcript) and CDKN2C are expressed in normal liver and hepatoblastoma.
- A shift in cyclin D gene expression (from D1 to D2/D3) is observed during malignant transformation and may contribute to hepatoblastoma.
- CDKN2A exhibits highly regulated expression in normal hepatic tissue.