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Design and implementation of a CORBA-based genome mapping system prototype

J Hu1, C Mungall, D Nicholson

  • 1Roslin Institute (Edinburgh), Midlothian, UK.

Bioinformatics (Oxford, England)
|June 2, 1998
PubMed
Summary
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Common Object Request Broker Architecture (CORBA) applications enhance bioinformatics resource interoperation. A CORBA prototype for animal genome mapping databases demonstrates improved database connectivity and graphical user interfaces.

Area of Science:

  • Bioinformatics
  • Distributed Systems

Background:

  • Common Object Request Broker Architecture (CORBA) is an open standard for distributed heterogeneous environments.
  • CORBA facilitates enhanced utilization, management, and interoperation of biological resources in bioinformatics.

Purpose of the Study:

  • Investigate challenges in developing CORBA applications for internet-based genome mapping information systems.
  • Focus on critical aspects like database connectivity and graphical user interfaces.

Main Methods:

  • Design and implementation of a CORBA prototype.
  • Development of a prototype for an animal genome mapping database.

Main Results:

  • Successful design and implementation of a CORBA prototype for an animal genome mapping database.

Related Experiment Videos

  • Demonstration of improved database connectivity and graphical user interfaces within the CORBA framework.

    • Conclusions:

    • CORBA is a viable solution for developing and deploying bioinformatics applications in distributed environments.
    • The prototype showcases the potential of CORBA for enhancing genome mapping information systems.