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Updated: Aug 9, 2026

Determination of Molecular Structures of HIV Envelope Glycoproteins using Cryo-Electron Tomography and Automated Sub-tomogram Averaging
Published on: December 1, 2011
Features of the SIVmac transmembrane glycoprotein cytoplasmic domain that are important for Env functions
B L Shacklett1, C Denesvre, B Boson
1ICGM-CNRS UPR 0415, Génétique des Virus, Institut Cochin de Génétique Moléculaire, Paris, France.
Abstract:
The cytoplasmic domain (CD) of the SIVmac transmembrane protein (TM) can affect viral infectivity by modulating several Env functions, notably fusogenic capacity and incorporation into virions. In addition, envelopes with a truncated CD are counterselected in primary cells in culture and in vivo in rhesus macaques, suggesting a role for this domain in viral persistence. Here, we have used mutagenesis to examine specific features of the SIVmac TM CD, including the conserved C-terminal alpha helix and the overall length of the CD. Several mutations dramatically reduced and/or delayed virus infectivity in lymphoid cell lines. Detailed analysis of mutants revealed defects in envelope stability, fusogenic capacity, and virion incorporation. The primary defect associated with an envelope containing a 64-residue CD was rapid degradation. A mutant Env lacking the C-terminal alpha helix but encoding an exceptionally long CD (373 residues) was highly fusogenic but inefficiently incorporated into virions. A third mutant, containing amino acid substitutions designed to alter the charge density of the C-terminal helix, retained cytopathic properties and showed enhanced fusogenic capacity but replicated with delayed kinetics. Taken together, these results demonstrate that CD sequence variation entails functional "tradeoffs" that can involve optimization of certain Env functions at the expense of others.
Insights
The SIVmac transmembrane protein's cytoplasmic domain (CD) is crucial for viral infectivity and persistence. Altering the CD's length or structure leads to functional tradeoffs, impacting envelope stability, fusion, and virion incorporation.
Area of Science:
- Virology
- Molecular Biology
- Immunology
Background:
- The cytoplasmic domain (CD) of the Simian Immunodeficiency Virus macaque (SIVmac) transmembrane protein (TM) influences viral infectivity.
- Truncated CDs are disadvantageous in vivo and in vitro, suggesting their importance for viral persistence.
Purpose of the Study:
- To investigate the role of specific features within the SIVmac TM CD, including its C-terminal alpha helix and overall length.
- To elucidate how mutations in the TM CD affect viral infectivity, envelope stability, fusogenic capacity, and virion incorporation.
Main Methods:
- Site-directed mutagenesis was employed to create SIVmac TM mutants with altered cytoplasmic domains.
- Infectivity assays were performed in lymphoid cell lines.
- Detailed analyses were conducted to assess envelope stability, fusogenic capacity, and virion incorporation of mutant viruses.
Main Results:
- Mutations in the SIVmac TM CD significantly reduced or delayed virus infectivity.
- A 64-residue CD mutant exhibited rapid degradation, indicating instability.
- A mutant lacking the C-terminal alpha helix showed high fusogenicity but poor virion incorporation.
- Modifications to the C-terminal helix charge density resulted in enhanced fusogenicity and cytopathic effects but delayed replication.
Conclusions:
- Sequence variations in the SIVmac TM CD lead to functional tradeoffs, optimizing some Env functions at the expense of others.
- The CD's length, C-terminal helix, and charge density are critical for maintaining viral infectivity and persistence.
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