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Mutational inactivation of aminoacylase-I in a small cell lung cancer cell line
R M Cook1, W A Franklin, M D Moore
1Department of Medicine, Veterans Affairs Medical Center, Denver, Colorado 80220, USA.
Abstract:
Small cell lung cancer (SCLC) cell lines and tumors invariably exhibit loss of heterozygosity (LOH) or, in rare cases, homozygous deletions involving part or all of chromosome arm 3p, suggesting the presence of 1 or more tumor-suppressor genes in this region. The gene encoding aminoacylase-I (ACYl) is localized on chromosome segment 3p21.1. ACYl enzymatic activity, protein, and mRNA have been demonstrated to be expressed at either undetectable or very low levels in a group of SCLC cell lines and tumors. The demonstration of mutational inactivation of ACYl would support the hypothesis that ACYl inactivation in SCLC confers a selective growth advantage. One of four SCLC cell lines with undetectable Acyl enzymatic activity and protein exhibited a compound mutation: nonconservative missense point mutations at codons 195 and 254. No wildtype sequence transcripts were identified in the cell line. Although nonmutational mechanisms for low or undetectable ACYl enzymatic activity, protein, and mRNA expression are most frequently operant in SCLC, the demonstration of a mutation supports selection for ACYl inactivation. Analysis of normal liver and a liver metastasis from the same patient from whom the NCI-H711 cell line was derived demonstrated that the mutation was neither germline nor an early event in the development of SCLC. It is of interest that several genes involved in the regulation of intracellular protein degradation are encoded by chromosome band 3p21 and display unusual expression in SCLC. The presence of other loci involved in protein degradation on chromosome band 3p21 and their aberrant expression in SCLC suggest that a variety of mechanisms involved in the normal degradation of intracellular proteins may be perturbed in this neoplasm.
Insights
Small cell lung cancer (SCLC) cells show low levels of aminoacylase-I (ACYI). Researchers found mutations in ACYI in one SCLC cell line, suggesting its inactivation may promote tumor growth.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Small cell lung cancer (SCLC) frequently shows chromosomal abnormalities on chromosome 3p.
- This region is suspected to harbor tumor-suppressor genes critical for SCLC development.
- Aminoacylase-I (ACYI), located on 3p21.1, is often expressed at low or undetectable levels in SCLC.
Purpose of the Study:
- To investigate the role of the ACYI gene in SCLC pathogenesis.
- To determine if mutations in ACYI contribute to SCLC development and growth.
Main Methods:
- Analysis of SCLC cell lines and tumors for ACYI expression (enzymatic activity, protein, mRNA).
- Sequencing of the ACYI gene in SCLC cell lines with low/undetectable expression.
- Investigation of mutation origin (germline vs. somatic) using patient-derived samples.
Main Results:
- Four SCLC cell lines exhibited undetectable ACYI activity and protein.
- One cell line harbored compound missense mutations in ACYI, with no wildtype transcripts detected.
- The identified mutation was not germline and not an early event in SCLC development.
- Other genes involved in protein degradation on chromosome 3p21 also show aberrant expression in SCLC.
Conclusions:
- While nonmutational mechanisms are common, ACYI gene mutation in SCLC supports selection for its inactivation.
- Aberrant expression of protein degradation genes on chromosome 3p21 suggests perturbed intracellular protein degradation pathways in SCLC.
- Further research into ACYI and other 3p21 genes may reveal novel therapeutic targets for SCLC.