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Identification of Legionella species by random amplified polymorphic DNA profiles
F Lo Presti1, S Riffard, F Vandenesch
1Centre National de Référence des Legionella, EA1655, Faculté de Médecine R. T. H. Laennec, 69372 Lyon Cedex 08, France. derba@cimac-res.univ-lyon1.fr
Abstract:
Random amplified polymorphic DNA (RAPD) was used for the identification of Legionella species. Primer SK2 (5'-CGGCGGCGGCGG-3') and standardized RAPD conditions gave the technique a reproducibility of 93 to 100%, depending on the species tested. Species-specific patterns corresponding to the 42 Legionella species were consequently defined by this method; the patterns were dependent on the recognition of a core of common bands for each species. This specificity was demonstrated by testing 65 type strains and 265 environmental and clinical isolates. No serogroup-specific profiles were obtained. A number of unidentified Legionella isolates potentially corresponding to new species were clustered in four groups. RAPD analysis appears to be a rapid and reproducible technique for identification of Legionella isolates to the species level without further restriction or hybridization.