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Updated: May 25, 2026

A Restriction Enzyme Based Cloning Method to Assess the In vitro Replication Capacity of HIV-1 Subtype C Gag-MJ4 Chimeric Viruses
Published on: August 31, 2014
HIV-1 variation diminishes CD4 T lymphocyte recognition
G C Harcourt1, S Garrard, M P Davenport
1Molecular Immunology Group, Nuffield Department of Clinical Medicine, University of Oxford, Oxford OX3 9DU, United Kingdom. harcourt@molbiol.ox.ac.uk
Viral mutations can evade immune responses. In HIV-1 infection, altered peptide ligands arise that fail to stimulate T cell help, potentially causing viral persistence by limiting effective antiviral immunity.
Area of Science:
- Immunology
- Virology
- Genetics
Background:
- Effective antiviral immunity relies on cytotoxic T lymphocytes and CD4(+) T lymphocyte help.
- Failure of T helper responses is a key factor in viral persistence.
- Human Immunodeficiency Virus type 1 (HIV-1) infection often involves complex immune evasion strategies.
Purpose of the Study:
- To investigate whether variations in HIV-1 CD4(+) T helper epitopes contribute to viral persistence.
- To identify specific HIV-1 epitopes and their natural variants.
- To assess the impact of these variations on T lymphocyte responses.
Main Methods:
- Assayed peripheral blood mononuclear cells from 43 asymptomatic HIV-1(+) patients for proliferative responses to HIV-1 antigens.
- Mapped dominant epitopes in two individuals to p24 Gag and p17 Gag, restricted by HLA-DR1 and HLA-DRB52c respectively.
- Analyzed naturally occurring variants of identified epitopes in proviral DNA and assessed their binding and stimulatory capacity.
Main Results:
- 12% of patients showed positive proliferative responses to HIV-1 antigens.
- Nine naturally occurring variants of the p24 Gag epitope were identified, all binding to HLA-DR1, but three failed to stimulate a CD4(+) T lymphocyte line.
- Variant antigens arising in HIV-1(+) patients can fail to stimulate T cell receptors of HLA class II-restricted lymphocytes, despite successful presentation.
- Variants also failed to stimulate fresh, uncultured cells, unlike the original peptide.
Conclusions:
- Naturally occurring variants of HIV-1 epitopes can arise that are not recognized by the circulating T lymphocyte repertoire.
- These altered peptide ligands may curtail crucial CD4(+) T lymphocyte helper responses.
- This immune evasion mechanism could contribute to viral persistence in HIV-1 infection, particularly where variant viruses are prevalent.
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