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DBcat: a catalog of biological databases

C Discala1, M Ninnin, F Achard

  • 1GIS Infobiogen, 7 rue Guy Môquet BP 8, 94801 Villejuif cedex, France.

Nucleic Acids Research
|December 10, 1998
PubMed
Summary

DBcat is a daily-updated catalog of over 400 biological databases, classified by application domains. It offers searchability via SRS server or web interface and downloadable files.

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Area of Science:

  • Bioinformatics
  • Biological Databases
  • Information Management

Background:

  • Biological research generates vast amounts of data requiring efficient management.
  • Numerous biological databases exist, but accessing and navigating them can be challenging.
  • A centralized, curated resource is needed to catalog and provide access to these databases.

Purpose of the Study:

  • To introduce DBcat, a comprehensive catalog of biological databases.
  • To provide a structured and searchable resource for biological information.
  • To facilitate access to over 400 biological databases.

Main Methods:

  • DBcat is maintained and curated daily at GIS Infobiogen.
  • Databases are classified by application domains.
  • A structured flat-file library is utilized.
  • Search functionality is provided via an SRS server and a dedicated Web interface.
  • Database files are available for download from an anonymous FTP server.

Main Results:

  • DBcat contains over 400 biological databases.
  • Databases are categorized by application domains.
  • The catalog is searchable through multiple access points.
  • Data is readily available for download.

Conclusions:

  • DBcat serves as a valuable, up-to-date resource for the biological research community.
  • It simplifies the discovery and access of relevant biological databases.
  • The catalog enhances biological data management and accessibility.

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